CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : CodonNum = 28 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M28F28LnonsynTtcCtc20093199010.99044426604-26606

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M28F28LTtcCtc1990120093All0.003806
M28F28LTtcCtc1107611078R.10.99694
M28F28LTtcCtc79417961B.1.1.70.007109
M28F28LTtcCtc316317B.1.10.005733
M28F28LTtcCtc111117B.10.001017
M28F28LTtcCtc101101B.1.1.2200.187732
M28F28LTtcCtc4545Q.80.007421
M28F28LTtcCtc3737B.1.20.000326
M28F28LTtcCtc3434B.1.1.5250.185792
M28F28LTtcCtc1717B.1.1.3170.006999
M28F28LTtcCtc1515B.1.1.250.008528
M28F28LTtcCtc1515B.1.5440.090361
M28F28LTtcCtc1414Q.10.001769
M28F28LTtcCtc1313B.1.4160.016497
M28F28LTtcCtc1212B.1.1.100.013378
M28F28LTtcCtc1111AY.4.20.000239
M28F28LTtcCtc1010P.10.000158
M28F28LTtcCtc99AY.40.000014
M28F28LTtcCtc67B.1.617.20.000023
M28F28LTtcCtc56AY.440.00003
M28F28LTtcCtc66B.1.177.730.003398
M28F28LTtcCtc55B.1.3750.004098
M28F28LTtcCtc55B.1.5760.004533
M28F28LTtcCtc44AY.430.000018
M28F28LTtcCtc44B0.000511
M28F28LTtcCtc44B.1.1600.000125
M28F28LTtcCtc44B.1.2580.000266
M28F28LTtcCtc44B.1.3690.001141
M28F28LTtcCtc44B.1.5260.000094
M28F28LTtcCtc33B.1.1.2220.000612
M28F28LTtcCtc33B.1.1.3110.001074
M28F28LTtcCtc33B.1.1.390.001529
M28F28LTtcCtc33B.1.1.5210.016043
M28F28LTtcCtc23B.1.1770.000026
M28F28LTtcCtc33B.1.3990.005803
M28F28LTtcCtc33B.1.4290.000071
M28F28LTtcCtc22AY.1180.000125
M28F28LTtcCtc22AY.260.000057
M28F28LTtcCtc22AY.30.00002
M28F28LTtcCtc22B.1.1.1530.002191
M28F28LTtcCtc22B.1.1.2910.001485
M28F28LTtcCtc22B.1.1.510.003436
M28F28LTtcCtc22B.1.1.830.00542
M28F28LTtcCtc22B.1.177.80.001505
M28F28LTtcCtc22B.1.3510.000059
M28F28LTtcCtc22B.1.5960.000174
M28F28LTtcCtc22B.1.6370.000146
M28F28LTtcCtc11A0.000387
M28F28LTtcCtc11AY.1160.000287
M28F28LTtcCtc11AY.250.000006
M28F28LTtcCtc11AY.420.00004
M28F28LTtcCtc11AY.520.000814
M28F28LTtcCtc11AY.9.10.000084
M28F28LTtcCtc11AY.9.20.000037
M28F28LTtcCtc11B.1.1.1960.005714
M28F28LTtcCtc11B.1.1.1980.001468
M28F28LTtcCtc11B.1.1.2140.000055
M28F28LTtcCtc11B.1.1.2360.006897
M28F28LTtcCtc11B.1.1.2630.001558
M28F28LTtcCtc11B.1.1.2770.000759
M28F28LTtcCtc11B.1.1.3050.003861
M28F28LTtcCtc11B.1.1.330.000421
M28F28LTtcCtc11B.1.1.4090.002833
M28F28LTtcCtc11B.1.1.4640.001473
M28F28LTtcCtc11B.1.1.5190.00004
M28F28LTtcCtc11B.1.1.5220.017241
M28F28LTtcCtc11B.1.1.80.003584
M28F28LTtcCtc11B.1.1610.017241
M28F28LTtcCtc11B.1.177.840.006667
M28F28LTtcCtc11B.1.2790.000514
M28F28LTtcCtc11B.1.36.180.00042
M28F28LTtcCtc11B.1.4680.005714
M28F28LTtcCtc11B.1.4970.000315
M28F28LTtcCtc11B.1.5300.007143
M28F28LTtcCtc11B.1.5330.009615
M28F28LTtcCtc11B.1.6090.000479
M28F28LTtcCtc11B.1.6280.000352
M28F28LTtcCtc11P.20.000187