CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : CodonNum = 208

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M208T208InonsynaCaaTa21992199127144-27146
M208T208TsynacAacT6214220.67954927144-27146
M208T208TsynacAacG6211800.28985527144-27146
M208T208TsynacAacC621190.030595827144-27146
M208T208deldelACA---174174127144-27146
M208T208KnonsynaCaaAa103103127144-27146
M208T208RnonsynaCaaGa4444127144-27146
M208T208SnonsynAcaTca4444127144-27146
M208T208AnonsynAcaGca3535127144-27146
M208T208PnonsynAcaCca1111127144-27146
M208T208LnonsynACACTT310.33333327144-27146
M208T208LnonsynACACTG310.33333327144-27146
M208T208LnonsynACaTTa310.33333327144-27146
M208T208YnonsynACATAC11127144-27146
M208T208XnonsynACATAG11127144-27146
M208T208QnonsynACaCAa11127144-27146

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M208T208IaCaaTa21992199All0.000421
M208T208TacAacT422621All0.000081
M208T208TacAacG180621All0.000034
M208T208TacAacC19621All0.000004
M208T208IaCaaTa386386B.1.1.70.000346
M208T208TacAacT240240B.1.221.41
M208T208IaCaaTa190190B.1.517.11
M208T208delACA---174174All0.000033
M208T208IaCaaTa164164AY.40.000255
M208T208delACA---149149B.1.177.210.011394
M208T208IaCaaTa129129AY.290.002035
M208T208IaCaaTa105105AY.430.000465
M208T208KaCaaAa103103All0.00002
M208T208TacAacT5497B.1.1.70.000048
M208T208TacAacG4397B.1.1.70.000038
M208T208IaCaaTa9393B.1.617.20.00035
M208T208IaCaaTa8787AY.1030.00054
M208T208IaCaaTa6666B.1.1.5190.002621
M208T208IaCaaTa6464B.1.20.000564
M208T208TacAacG4862AY.40.000075
M208T208TacAacT1462AY.40.000022
M208T208IaCaaTa5555AY.30.000547
M208T208IaCaaTa4949AY.50.001012
M208T208KaCaaAa4848AY.1020.001273
M208T208IaCaaTa4646AY.440.00028
M208T208SAcaTca4444All0.000008
M208T208RaCaaGa4444All0.000008
M208T208IaCaaTa4343AY.250.000259
M208T208IaCaaTa4242B.1.1770.000553
M208T208IaCaaTa4040AY.7.10.004508
M208T208TacAacT3737B.1.1770.000487
M208T208IaCaaTa3636B.1.3510.00107
M208T208AAcaGca3535All0.000007
M208T208IaCaaTa3131B.10.000284
M208T208IaCaaTa2828B.1.5260.000658
M208T208IaCaaTa2727AY.260.000764
M208T208TacAacG1622B.1.617.20.00006
M208T208TacAacT622B.1.617.20.000023
M208T208IaCaaTa1919AY.4.20.000412
M208T208delACA---1919B.1.1.70.000017
M208T208TacAacG1019B.1.20.000088
M208T208TacAacT519B.1.20.000044
M208T208TacAacC419B.1.20.000035
M208T208IaCaaTa1818AY.470.00056
M208T208IaCaaTa1616AY.1020.000424
M208T208RaCaaGa1515AY.40.000023
M208T208IaCaaTa1515AY.420.000603
M208T208TacAacT1315AY.430.000058
M208T208TacAacG215AY.430.000009
M208T208IaCaaTa1515B.1.10.000272
M208T208KaCaaAa1414AY.46.40.002303
M208T208IaCaaTa1414B.1.2210.000994
M208T208TacAacG1213AY.250.000072
M208T208TacAacC113AY.250.000006
M208T208IaCaaTa1212AY.1000.000552
M208T208SAcaTca1212B.1.1.70.000011
M208T208IaCaaTa1212B.1.5750.003641
M208T208IaCaaTa1212P.10.000189
M208T208PAcaCca1111All0.000002
M208T208TacAacC711AY.440.000043
M208T208TacAacG311AY.440.000018
M208T208TacAacT111AY.440.000006
M208T208IaCaaTa1111AY.980.000869
M208T208KaCaaAa1111B.1.617.20.000041
M208T208IaCaaTa1010AY.1170.000845
M208T208IaCaaTa1010B.1.4270.000505
M208T208SAcaTca1010B.1.4290.000235
M208T208TacAacG710P.10.00011
M208T208TacAacC210P.10.000032
M208T208TacAacT110P.10.000016
M208T208IaCaaTa99AY.1190.000318
M208T208TacAacG99AY.1200.000335
M208T208IaCaaTa99AY.350.002097
M208T208AAcaGca99B.1.1.70.000008
M208T208PAcaCca99B.1.1.70.000008
M208T208IaCaaTa99B.1.6210.000797
M208T208IaCaaTa88AY.390.000198
M208T208IaCaaTa88AY.7.20.004474
M208T208RaCaaGa88B.1.1.70.000007
M208T208IaCaaTa88B.1.6370.000585
M208T208IaCaaTa77AY.200.000272
M208T208IaCaaTa66AY.1200.000223
M208T208IaCaaTa66AY.230.000418
M208T208TacAacG66AY.780.009245
M208T208IaCaaTa66AY.9.20.00022
M208T208TacAacT66B.1.1990.024793
M208T208SAcaTca66B.1.5260.000141
M208T208IaCaaTa66Q.10.000758
M208T208IaCaaTa66R.10.00054
M208T208IaCaaTa55AY.1110.000916
M208T208IaCaaTa55AY.46.60.000361
M208T208IaCaaTa55AY.90.000338
M208T208IaCaaTa55AY.98.10.000242
M208T208IaCaaTa55AY.99.20.000461
M208T208IaCaaTa55B.1.1.100.005574
M208T208IaCaaTa55B.1.1.3160.004625
M208T208KaCaaAa55B.1.1.70.000004
M208T208IaCaaTa55B.1.177.650.003327
M208T208AAcaGca55B.1.2580.000333
M208T208IaCaaTa55B.1.4290.000118
M208T208RaCaaGa55B.1.617.20.000019
M208T208IaCaaTa55D.20.000375
M208T208IaCaaTa55P.1.140.000239
M208T208TacAacT34AY.1030.000019
M208T208TacAacG14AY.1030.000006
M208T208TacAacT44AY.120.001264
M208T208IaCaaTa44AY.1210.000541
M208T208KaCaaAa44AY.440.000024
M208T208IaCaaTa44AY.580.00363
M208T208IaCaaTa44AY.740.000463
M208T208delACA---44B.10.000037
M208T208TacAacG24B.10.000018
M208T208TacAacT24B.10.000018
M208T208TacAacG24B.1.10.000036
M208T208TacAacT24B.1.10.000036
M208T208IaCaaTa44B.1.1.1410.008048
M208T208IaCaaTa44B.1.2580.000266
M208T208AAcaGca44B.1.6190.003484
M208T208LACACTG13All0
M208T208LACACTT13All0
M208T208LACaTTa13All0
M208T208TacAacG33AY.1000.000138
M208T208KaCaaAa33AY.1130.000427
M208T208IaCaaTa33AY.1180.000188
M208T208TacAacG23AY.230.000139
M208T208TacAacT13AY.230.00007
M208T208RaCaaGa33AY.250.000018
M208T208IaCaaTa33AY.29.10.000662
M208T208IaCaaTa33AY.330.0002
M208T208IaCaaTa33AY.360.000445
M208T208IaCaaTa33B.1.1.2140.000166
M208T208IaCaaTa33B.1.1.3470.054545
M208T208IaCaaTa33B.1.1.4860.004732
M208T208IaCaaTa33B.1.177.70.000495
M208T208SAcaTca33B.1.20.000026
M208T208IaCaaTa33B.1.360.000438
M208T208KaCaaAa33B.1.466.20.001174
M208T208TacAacT33B.1.5250.000339
M208T208IaCaaTa33B.1.5250.000339
M208T208IaCaaTa33B.1.6260.017143
M208T208IaCaaTa33P.20.00056
M208T208IaCaaTa22A.270.003311
M208T208IaCaaTa22AD.20.000438
M208T208TacAacC22AY.1060.00067
M208T208IaCaaTa22AY.20.000712
M208T208TacAacT22AY.200.000078
M208T208TacAacT12AY.260.000028
M208T208TacAacG12AY.260.000028
M208T208AAcaGca22AY.270.000129
M208T208AAcaGca22AY.290.000032
M208T208IaCaaTa22AY.340.000194
M208T208KaCaaAa22AY.390.000049
M208T208IaCaaTa22AY.39.10.000079
M208T208AAcaGca22AY.40.000003
M208T208SAcaTca22AY.40.000003
M208T208KaCaaAa22AY.40.000003
M208T208IaCaaTa22AY.450.000243
M208T208IaCaaTa22AY.46.40.000329
M208T208IaCaaTa22AY.480.00093
M208T208IaCaaTa22AY.5.30.000675
M208T208IaCaaTa22AY.540.000191
M208T208IaCaaTa22AY.620.000871
M208T208IaCaaTa22AY.700.000417
M208T208TacAacG12AY.840.000437
M208T208TacAacT12AY.840.000437
M208T208IaCaaTa22AY.850.000854
M208T208TacAacT22AY.98.10.000097
M208T208TacAacT12B0.000128
M208T208TacAacG12B0.000128
M208T208IaCaaTa22B.1.1.2220.000408
M208T208TacAacT22B.1.1.3260.003521
M208T208IaCaaTa22B.1.1.4160.00181
M208T208IaCaaTa22B.1.1600.000062
M208T208IaCaaTa22B.1.177.120.000303
M208T208IaCaaTa22B.1.2100.004264
M208T208IaCaaTa22B.1.2410.001623
M208T208TacAacG22B.1.2580.000133
M208T208IaCaaTa22B.1.3050.004301
M208T208TacAacG22B.1.36.100.009569
M208T208IaCaaTa22B.1.36.100.009569
M208T208IaCaaTa22B.1.4130.008511
M208T208TacAacT22B.1.5260.000047
M208T208IaCaaTa22B.1.5510.002581
M208T208IaCaaTa22B.1.5640.000852
M208T208IaCaaTa22B.1.5950.000522
M208T208IaCaaTa22B.1.595.40.014599
M208T208TacAacT22B.1.617.10.000258
M208T208IaCaaTa22P.1.100.000539
M208T208SAcaTca22P.1.140.000096
M208T208IaCaaTa22P.1.150.000465
M208T208IaCaaTa22P.1.170.000324
M208T208RaCaaGa22P.1.170.000324
M208T208IaCaaTa22P.1.40.001953
M208T208TacAacC22P.20.000373
M208T208IaCaaTa22Q.30.00029
M208T208KaCaaAa110.055556
M208T208PAcaCca110.055556
M208T208QACaCAa110.055556
M208T208delACA---11A0.000387
M208T208IaCaaTa11A0.000387
M208T208TacAacT11A.10.000282
M208T208IaCaaTa11A.2.20.001689
M208T208TacAacT11A.2.50.000499
M208T208IaCaaTa11A.2.5.20.001572
M208T208IaCaaTa11A.210.00277
M208T208TacAacG11AD.20.000219
M208T208QACaCAa11All0
M208T208YACATAC11All0
M208T208XACATAG11All0
M208T208IaCaaTa11AU.30.00211
M208T208TacAacG11AY.1020.000027
M208T208RaCaaGa11AY.1070.000466
M208T208IaCaaTa11AY.1090.00074
M208T208RaCaaGa11AY.1110.000183
M208T208IaCaaTa11AY.1130.000142
M208T208IaCaaTa11AY.1140.000231
M208T208IaCaaTa11AY.1160.000287
M208T208IaCaaTa11AY.120.000316
M208T208SAcaTca11AY.1200.000037
M208T208IaCaaTa11AY.120.10.000321
M208T208IaCaaTa11AY.140.000088
M208T208IaCaaTa11AY.160.00038
M208T208AAcaGca11AY.190.00114
M208T208KaCaaAa11AY.200.000039
M208T208SAcaTca11AY.230.00007
M208T208LACACTG11AY.250.000006
M208T208AAcaGca11AY.250.000006
M208T208KaCaaAa11AY.260.000028
M208T208SAcaTca11AY.260.000028
M208T208RaCaaGa11AY.270.000065
M208T208KaCaaAa11AY.30.00001
M208T208AAcaGca11AY.3.10.000085
M208T208TacAacT11AY.3.10.000085
M208T208TacAacG11AY.390.000025
M208T208IaCaaTa11AY.39.20.001541
M208T208delACA---11AY.40.000002
M208T208IaCaaTa11AY.410.000294
M208T208AAcaGca11AY.420.00004
M208T208RaCaaGa11AY.430.000004
M208T208SAcaTca11AY.440.000006
M208T208XACATAG11AY.440.000006
M208T208IaCaaTa11AY.46.20.000635
M208T208TacAacT11AY.470.000031
M208T208PAcaCca11AY.470.000031
M208T208TacAacT11AY.50.000021
M208T208RaCaaGa11AY.500.000799
M208T208IaCaaTa11AY.560.001605
M208T208IaCaaTa11AY.590.00053
M208T208IaCaaTa11AY.60.000041
M208T208IaCaaTa11AY.610.000105
M208T208IaCaaTa11AY.640.000595
M208T208SAcaTca11AY.670.000464
M208T208IaCaaTa11AY.730.000665
M208T208IaCaaTa11AY.750.000056
M208T208IaCaaTa11AY.75.10.00018
M208T208IaCaaTa11AY.790.001211
M208T208LACaTTa11AY.820.001357
M208T208IaCaaTa11AY.890.004902
M208T208IaCaaTa11AY.9.10.000084
M208T208KaCaaAa11AY.9.10.000084
M208T208IaCaaTa11AY.920.000287
M208T208SAcaTca11AY.960.002075
M208T208KaCaaAa11B0.000128
M208T208RaCaaGa11B.10.000009
M208T208KaCaaAa11B.10.000009
M208T208KaCaaAa11B.1.10.000018
M208T208AAcaGca11B.1.10.000018
M208T208IaCaaTa11B.1.1.1860.003436
M208T208TacAacT11B.1.1.1980.001468
M208T208IaCaaTa11B.1.1.2260.005814
M208T208IaCaaTa11B.1.1.2310.003096
M208T208IaCaaTa11B.1.1.2400.004695
M208T208IaCaaTa11B.1.1.250.000569
M208T208IaCaaTa11B.1.1.2700.010309
M208T208IaCaaTa11B.1.1.2730.006757
M208T208IaCaaTa11B.1.1.2770.000759
M208T208IaCaaTa11B.1.1.2840.000107
M208T208IaCaaTa11B.1.1.3110.000358
M208T208IaCaaTa11B.1.1.3170.000412
M208T208IaCaaTa11B.1.1.3180.000302
M208T208IaCaaTa11B.1.1.330.000421
M208T208IaCaaTa11B.1.1.3320.03125
M208T208RaCaaGa11B.1.1.3350.012987
M208T208TacAacT11B.1.1.370.000193
M208T208TacAacG11B.1.1.3890.006061
M208T208AAcaGca11B.1.1.480.002874
M208T208IaCaaTa11B.1.1.500.000679
M208T208AAcaGca11B.1.1.5190.00004
M208T208TacAacT11B.1.1.5190.00004
M208T208TacAacG11B.1.1.630.000386
M208T208IaCaaTa11B.1.1.970.029412
M208T208IaCaaTa11B.1.110.30.000718
M208T208IaCaaTa11B.1.1390.000733
M208T208IaCaaTa11B.1.1470.000756
M208T208IaCaaTa11B.1.1570.002985
M208T208RaCaaGa11B.1.1600.000031
M208T208RaCaaGa11B.1.160.220.006757
M208T208SAcaTca11B.1.1770.000013
M208T208RaCaaGa11B.1.1770.000013
M208T208AAcaGca11B.1.1770.000013
M208T208IaCaaTa11B.1.177.100.000878
M208T208IaCaaTa11B.1.177.170.000821
M208T208IaCaaTa11B.1.177.210.000076
M208T208IaCaaTa11B.1.177.300.002513
M208T208IaCaaTa11B.1.177.580.001332
M208T208TacAacT11B.1.177.600.000218
M208T208IaCaaTa11B.1.177.630.002703
M208T208IaCaaTa11B.1.177.680.015152
M208T208TacAacT11B.1.177.70.000165
M208T208AAcaGca11B.1.177.750.001041
M208T208IaCaaTa11B.1.177.750.001041
M208T208IaCaaTa11B.1.177.770.000726
M208T208IaCaaTa11B.1.177.860.000183
M208T208IaCaaTa11B.1.1790.003759
M208T208IaCaaTa11B.1.214.20.0006
M208T208KaCaaAa11B.1.2210.000071
M208T208IaCaaTa11B.1.2320.000537
M208T208TacAacG11B.1.2340.000132
M208T208KaCaaAa11B.1.2400.000216
M208T208IaCaaTa11B.1.2430.00007
M208T208IaCaaTa11B.1.2520.006623
M208T208IaCaaTa11B.1.258.70.001912
M208T208IaCaaTa11B.1.258.90.005
M208T208IaCaaTa11B.1.2640.012346
M208T208IaCaaTa11B.1.2790.000514
M208T208SAcaTca11B.1.3110.000275
M208T208IaCaaTa11B.1.3110.000275
M208T208IaCaaTa11B.1.3200.001245
M208T208IaCaaTa11B.1.3250.006897
M208T208IaCaaTa11B.1.3330.010526
M208T208IaCaaTa11B.1.3490.000715
M208T208IaCaaTa11B.1.3500.002933
M208T208RaCaaGa11B.1.3510.00003
M208T208IaCaaTa11B.1.351.20.000303
M208T208IaCaaTa11B.1.36.180.00042
M208T208IaCaaTa11B.1.3600.012658
M208T208IaCaaTa11B.1.3620.001541
M208T208IaCaaTa11B.1.4080.00369
M208T208LACACTT11B.1.4290.000024
M208T208TacAacT11B.1.4290.000024
M208T208IaCaaTa11B.1.4360.001029
M208T208IaCaaTa11B.1.438.10.000107
M208T208TacAacC11B.1.466.20.000391
M208T208IaCaaTa11B.1.4970.000315
M208T208IaCaaTa11B.1.5090.000866
M208T208TacAacT11B.1.5160.001957
M208T208IaCaaTa11B.1.5170.000427
M208T208IaCaaTa11B.1.5610.000397
M208T208IaCaaTa11B.1.5680.001111
M208T208TacAacT11B.1.5960.000087
M208T208IaCaaTa11B.1.6090.000479
M208T208IaCaaTa11B.1.617.10.000129
M208T208AAcaGca11B.1.617.20.000004
M208T208YACATAC11B.1.617.20.000004
M208T208SAcaTca11B.1.617.20.000004
M208T208TacAacT11B.1.6180.004032
M208T208TacAacT11B.1.6210.000089
M208T208IaCaaTa11B.1.6280.000352
M208T208KaCaaAa11B.1.6370.000073
M208T208IaCaaTa11B.1.810.021277
M208T208IaCaaTa11B.1.930.000934
M208T208IaCaaTa11B.3.10.001658
M208T208IaCaaTa11B.4.80.071429
M208T208IaCaaTa11C.370.000116
M208T208TacAacT11D.20.000075
M208T208AAcaGca11P.10.000016
M208T208TacAacT11P.1.150.000232
M208T208TacAacG11Q.80.000165