CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
M | 175 | T175T | syn | acG | acA | 5115 | 3224 | 0.630303 | 27045-27047 | |
M | 175 | T175T | syn | acG | acT | 5115 | 1863 | 0.364223 | 27045-27047 | |
M | 175 | T175T | syn | acG | acC | 5115 | 28 | 0.0054741 | 27045-27047 | |
M | 175 | T175M | nonsyn | aCg | aTg | 2790 | 2790 | 1 | 27045-27047 | |
M | 175 | T175del | del | ACG | --- | 144 | 144 | 1 | 27045-27047 | |
M | 175 | T175K | nonsyn | aCg | aAg | 49 | 49 | 1 | 27045-27047 | |
M | 175 | T175A | nonsyn | Acg | Gcg | 11 | 11 | 1 | 27045-27047 | |
M | 175 | T175R | nonsyn | aCg | aGg | 4 | 4 | 1 | 27045-27047 | |
M | 175 | T175N | nonsyn | aCG | aAT | 4 | 4 | 1 | 27045-27047 | |
M | 175 | T175L | nonsyn | ACg | TTg | 4 | 3 | 0.75 | 27045-27047 | |
M | 175 | T175del1 | del | acG | ac- | 4 | 3 | 0.75 | 27045-27047 | |
M | 175 | T175L | nonsyn | ACG | TTA | 4 | 1 | 0.25 | 27045-27047 | |
M | 175 | T175del1 | del | ACg | -Tg | 4 | 1 | 0.25 | 27045-27047 | |
M | 175 | T175I | nonsyn | aCG | aTT | 3 | 3 | 1 | 27045-27047 | |
M | 175 | T175S | nonsyn | Acg | Tcg | 2 | 2 | 1 | 27045-27047 | |
M | 175 | T175P | nonsyn | Acg | Ccg | 2 | 1 | 0.5 | 27045-27047 | |
M | 175 | T175P | nonsyn | AcG | CcT | 2 | 1 | 0.5 | 27045-27047 | |
M | 175 | T175V | nonsyn | ACG | GTA | 1 | 1 | 1 | 27045-27047 | |
M | 175 | T175del2 | del | aCG | a-- | 1 | 1 | 1 | 27045-27047 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
M | 175 | T175T | acG | acA | 3224 | 5115 | All | 0.000617 |
M | 175 | T175T | acG | acT | 1863 | 5115 | All | 0.000356 |
M | 175 | T175T | acG | acC | 28 | 5115 | All | 0.000005 |
M | 175 | T175M | aCg | aTg | 2790 | 2790 | All | 0.000534 |
M | 175 | T175T | acG | acA | 1385 | 1386 | AY.30 | 0.548081 |
M | 175 | T175T | acG | acT | 1 | 1386 | AY.30 | 0.000396 |
M | 175 | T175M | aCg | aTg | 1222 | 1222 | B.1.1 | 0.022168 |
M | 175 | T175T | acG | acA | 564 | 564 | AY.3.1 | 0.048086 |
M | 175 | T175T | acG | acT | 419 | 494 | AY.4 | 0.000652 |
M | 175 | T175T | acG | acA | 73 | 494 | AY.4 | 0.000114 |
M | 175 | T175T | acG | acC | 2 | 494 | AY.4 | 0.000003 |
M | 175 | T175T | acG | acT | 190 | 353 | B.1.1.7 | 0.00017 |
M | 175 | T175T | acG | acA | 162 | 353 | B.1.1.7 | 0.000145 |
M | 175 | T175T | acG | acC | 1 | 353 | B.1.1.7 | 0.000001 |
M | 175 | T175T | acG | acA | 221 | 254 | AY.43 | 0.000979 |
M | 175 | T175T | acG | acT | 32 | 254 | AY.43 | 0.000142 |
M | 175 | T175T | acG | acC | 1 | 254 | AY.43 | 0.000004 |
M | 175 | T175T | acG | acA | 144 | 233 | B.1.617.2 | 0.000542 |
M | 175 | T175T | acG | acT | 83 | 233 | B.1.617.2 | 0.000313 |
M | 175 | T175T | acG | acC | 6 | 233 | B.1.617.2 | 0.000023 |
M | 175 | T175T | acG | acA | 124 | 198 | AY.25 | 0.000746 |
M | 175 | T175T | acG | acT | 74 | 198 | AY.25 | 0.000445 |
M | 175 | T175M | aCg | aTg | 196 | 196 | B.1.1.7 | 0.000175 |
M | 175 | T175T | acG | acT | 182 | 185 | AY.4.2 | 0.003947 |
M | 175 | T175T | acG | acA | 3 | 185 | AY.4.2 | 0.000065 |
M | 175 | T175M | aCg | aTg | 152 | 152 | AY.4 | 0.000237 |
M | 175 | T175T | acG | acT | 149 | 150 | P.1 | 0.002347 |
M | 175 | T175T | acG | acA | 1 | 150 | P.1 | 0.000016 |
M | 175 | T175del | ACG | --- | 144 | 144 | All | 0.000028 |
M | 175 | T175del | ACG | --- | 121 | 121 | B.1.177.21 | 0.009253 |
M | 175 | T175M | aCg | aTg | 119 | 119 | B.1.617.2 | 0.000448 |
M | 175 | T175M | aCg | aTg | 103 | 103 | B.1.1.257 | 1 |
M | 175 | T175T | acG | acT | 85 | 98 | AY.44 | 0.000517 |
M | 175 | T175T | acG | acA | 12 | 98 | AY.44 | 0.000073 |
M | 175 | T175T | acG | acC | 1 | 98 | AY.44 | 0.000006 |
M | 175 | T175M | aCg | aTg | 82 | 82 | B.1 | 0.000751 |
M | 175 | T175T | acG | acA | 59 | 71 | B.1.2 | 0.00052 |
M | 175 | T175T | acG | acT | 10 | 71 | B.1.2 | 0.000088 |
M | 175 | T175T | acG | acC | 2 | 71 | B.1.2 | 0.000018 |
M | 175 | T175M | aCg | aTg | 70 | 70 | B.1.1.323 | 0.985915 |
M | 175 | T175T | acG | acA | 61 | 63 | B.1.177 | 0.000803 |
M | 175 | T175T | acG | acT | 2 | 63 | B.1.177 | 0.000026 |
M | 175 | T175T | acG | acT | 55 | 55 | B.1.36.24 | 0.339506 |
M | 175 | T175M | aCg | aTg | 52 | 52 | B.1.1.142 | 0.912281 |
M | 175 | T175M | aCg | aTg | 52 | 52 | B.1.1.17 | 0.866667 |
M | 175 | T175K | aCg | aAg | 49 | 49 | All | 0.000009 |
M | 175 | T175M | aCg | aTg | 48 | 48 | AY.43 | 0.000213 |
M | 175 | T175T | acG | acT | 34 | 46 | B.1 | 0.000311 |
M | 175 | T175T | acG | acA | 11 | 46 | B.1 | 0.000101 |
M | 175 | T175T | acG | acC | 1 | 46 | B.1 | 0.000009 |
M | 175 | T175T | acG | acT | 26 | 43 | AY.103 | 0.000161 |
M | 175 | T175T | acG | acA | 17 | 43 | AY.103 | 0.000106 |
M | 175 | T175M | aCg | aTg | 43 | 43 | B.1.177 | 0.000566 |
M | 175 | T175T | acG | acA | 37 | 41 | AY.85 | 0.015805 |
M | 175 | T175T | acG | acT | 4 | 41 | AY.85 | 0.001709 |
M | 175 | T175M | aCg | aTg | 38 | 38 | AY.29 | 0.000599 |
M | 175 | T175T | acG | acT | 27 | 34 | AY.3 | 0.000269 |
M | 175 | T175T | acG | acA | 7 | 34 | AY.3 | 0.00007 |
M | 175 | T175M | aCg | aTg | 33 | 33 | AY.14 | 0.002904 |
M | 175 | T175M | aCg | aTg | 33 | 33 | AY.25 | 0.000198 |
M | 175 | T175T | acG | acA | 32 | 32 | AE.8 | 0.015648 |
M | 175 | T175M | aCg | aTg | 27 | 27 | AY.27 | 0.001747 |
M | 175 | T175T | acG | acT | 20 | 27 | AY.5 | 0.000413 |
M | 175 | T175T | acG | acA | 7 | 27 | AY.5 | 0.000145 |
M | 175 | T175T | acG | acA | 26 | 26 | B.1.8 | 0.051282 |
M | 175 | T175T | acG | acT | 24 | 25 | AY.13 | 0.003863 |
M | 175 | T175T | acG | acA | 1 | 25 | AY.13 | 0.000161 |
M | 175 | T175T | acG | acT | 25 | 25 | AY.33 | 0.001669 |
M | 175 | T175M | aCg | aTg | 25 | 25 | AY.44 | 0.000152 |
M | 175 | T175T | acG | acA | 15 | 25 | P.1.14 | 0.000717 |
M | 175 | T175T | acG | acT | 10 | 25 | P.1.14 | 0.000478 |
M | 175 | T175T | acG | acT | 16 | 22 | AY.102 | 0.000424 |
M | 175 | T175T | acG | acA | 6 | 22 | AY.102 | 0.000159 |
M | 175 | T175T | acG | acA | 22 | 22 | B.1.160.26 | 0.053269 |
M | 175 | T175T | acG | acT | 21 | 21 | B.1.595 | 0.00548 |
M | 175 | T175M | aCg | aTg | 20 | 20 | B.1.177.60 | 0.004369 |
M | 175 | T175M | aCg | aTg | 20 | 20 | B.1.2 | 0.000176 |
M | 175 | T175T | acG | acA | 18 | 20 | B.1.637 | 0.001315 |
M | 175 | T175T | acG | acC | 1 | 20 | B.1.637 | 0.000073 |
M | 175 | T175T | acG | acT | 1 | 20 | B.1.637 | 0.000073 |
M | 175 | T175K | aCg | aAg | 19 | 19 | AY.44 | 0.000116 |
M | 175 | T175M | aCg | aTg | 17 | 17 | AY.26 | 0.000481 |
M | 175 | T175M | aCg | aTg | 17 | 17 | B | 0.002173 |
M | 175 | T175T | acG | acT | 12 | 17 | B.1.1.519 | 0.000477 |
M | 175 | T175T | acG | acA | 5 | 17 | B.1.1.519 | 0.000199 |
M | 175 | T175T | acG | acT | 16 | 17 | P.2 | 0.002986 |
M | 175 | T175T | acG | acA | 1 | 17 | P.2 | 0.000187 |
M | 175 | T175T | acG | acT | 9 | 16 | AY.47 | 0.00028 |
M | 175 | T175T | acG | acA | 7 | 16 | AY.47 | 0.000218 |
M | 175 | T175M | aCg | aTg | 16 | 16 | AY.99.2 | 0.001475 |
M | 175 | T175T | acG | acT | 15 | 16 | B.1.1.50 | 0.010183 |
M | 175 | T175T | acG | acA | 1 | 16 | B.1.1.50 | 0.000679 |
M | 175 | T175M | aCg | aTg | 15 | 15 | AY.103 | 0.000093 |
M | 175 | T175M | aCg | aTg | 15 | 15 | AY.3 | 0.000149 |
M | 175 | T175T | acG | acT | 15 | 15 | AY.98.1 | 0.000726 |
M | 175 | T175del | ACG | --- | 15 | 15 | B.1.1.7 | 0.000013 |
M | 175 | T175M | aCg | aTg | 14 | 14 | AY.102 | 0.000371 |
M | 175 | T175M | aCg | aTg | 13 | 13 | AY.118 | 0.000814 |
M | 175 | T175T | acG | acA | 12 | 12 | AY.20 | 0.000466 |
M | 175 | T175T | acG | acT | 10 | 12 | AY.39 | 0.000247 |
M | 175 | T175T | acG | acA | 2 | 12 | AY.39 | 0.000049 |
M | 175 | T175T | acG | acT | 11 | 12 | AY.61 | 0.001153 |
M | 175 | T175T | acG | acA | 1 | 12 | AY.61 | 0.000105 |
M | 175 | T175T | acG | acT | 9 | 12 | B.1.243 | 0.000626 |
M | 175 | T175T | acG | acA | 3 | 12 | B.1.243 | 0.000209 |
M | 175 | T175T | acG | acT | 12 | 12 | B.1.258 | 0.000799 |
M | 175 | T175A | Acg | Gcg | 11 | 11 | All | 0.000002 |
M | 175 | T175T | acG | acT | 10 | 11 | B.1.1 | 0.000181 |
M | 175 | T175T | acG | acA | 1 | 11 | B.1.1 | 0.000018 |
M | 175 | T175T | acG | acA | 11 | 11 | B.1.577 | 0.00756 |
M | 175 | T175M | aCg | aTg | 10 | 10 | AY.33 | 0.000668 |
M | 175 | T175T | acG | acT | 10 | 10 | AY.4.3 | 0.008418 |
M | 175 | T175M | aCg | aTg | 10 | 10 | AY.6 | 0.000411 |
M | 175 | T175T | acG | acT | 8 | 10 | B.1.429 | 0.000188 |
M | 175 | T175T | acG | acA | 2 | 10 | B.1.429 | 0.000047 |
M | 175 | T175T | acG | acA | 10 | 10 | R.1 | 0.0009 |
M | 175 | T175K | aCg | aAg | 9 | 9 | AY.94 | 0.003984 |
M | 175 | T175T | acG | acT | 9 | 9 | AZ.2 | 0.007389 |
M | 175 | T175M | aCg | aTg | 9 | 9 | B.1.1.222 | 0.001836 |
M | 175 | T175M | aCg | aTg | 9 | 9 | B.1.1.319 | 0.157895 |
M | 175 | T175T | acG | acT | 6 | 9 | B.1.160 | 0.000187 |
M | 175 | T175T | acG | acA | 3 | 9 | B.1.160 | 0.000094 |
M | 175 | T175T | acG | acT | 7 | 9 | B.1.36.29 | 0.003621 |
M | 175 | T175T | acG | acA | 2 | 9 | B.1.36.29 | 0.001035 |
M | 175 | T175T | acG | acT | 9 | 9 | B.1.427 | 0.000454 |
M | 175 | T175T | acG | acA | 8 | 8 | A.2.5 | 0.003992 |
M | 175 | T175M | aCg | aTg | 8 | 8 | AY.39 | 0.000198 |
M | 175 | T175T | acG | acA | 5 | 8 | AY.46.6 | 0.000361 |
M | 175 | T175T | acG | acT | 3 | 8 | AY.46.6 | 0.000217 |
M | 175 | T175M | aCg | aTg | 8 | 8 | B.1.1.434 | 0.002788 |
M | 175 | T175M | aCg | aTg | 8 | 8 | B.1.1.519 | 0.000318 |
M | 175 | T175T | acG | acA | 8 | 8 | B.1.258.5 | 0.070175 |
M | 175 | T175M | aCg | aTg | 8 | 8 | B.1.391 | 0.009019 |
M | 175 | T175M | aCg | aTg | 8 | 8 | B.1.429 | 0.000188 |
M | 175 | T175M | aCg | aTg | 8 | 8 | B.1.596 | 0.000697 |
M | 175 | T175T | acG | acT | 5 | 8 | B.1.617.1 | 0.000645 |
M | 175 | T175T | acG | acA | 3 | 8 | B.1.617.1 | 0.000387 |
M | 175 | T175T | acG | acA | 5 | 7 | AY.26 | 0.000142 |
M | 175 | T175T | acG | acT | 2 | 7 | AY.26 | 0.000057 |
M | 175 | T175T | acG | acT | 5 | 7 | AY.29 | 0.000079 |
M | 175 | T175T | acG | acA | 2 | 7 | AY.29 | 0.000032 |
M | 175 | T175M | aCg | aTg | 7 | 7 | AY.3.1 | 0.000597 |
M | 175 | T175M | aCg | aTg | 7 | 7 | AY.75 | 0.000392 |
M | 175 | T175T | acG | acT | 7 | 7 | AY.92 | 0.002011 |
M | 175 | T175T | acG | acT | 7 | 7 | B.1.240 | 0.001509 |
M | 175 | T175M | aCg | aTg | 6 | 6 | AY.20 | 0.000233 |
M | 175 | T175T | acG | acT | 5 | 6 | AY.23 | 0.000349 |
M | 175 | T175T | acG | acA | 1 | 6 | AY.23 | 0.00007 |
M | 175 | T175M | aCg | aTg | 6 | 6 | AY.5 | 0.000124 |
M | 175 | T175T | acG | acA | 4 | 6 | AY.54 | 0.000381 |
M | 175 | T175T | acG | acT | 2 | 6 | AY.54 | 0.000191 |
M | 175 | T175T | acG | acT | 6 | 6 | AY.75 | 0.000336 |
M | 175 | T175M | aCg | aTg | 6 | 6 | B.1.1.214 | 0.000333 |
M | 175 | T175T | acG | acT | 5 | 6 | B.1.221 | 0.000355 |
M | 175 | T175T | acG | acA | 1 | 6 | B.1.221 | 0.000071 |
M | 175 | T175M | aCg | aTg | 6 | 6 | B.1.351 | 0.000178 |
M | 175 | T175T | acG | acT | 5 | 6 | B.1.351 | 0.000149 |
M | 175 | T175T | acG | acA | 1 | 6 | B.1.351 | 0.00003 |
M | 175 | T175M | aCg | aTg | 6 | 6 | B.1.526 | 0.000141 |
M | 175 | T175T | acG | acA | 4 | 6 | B.1.526 | 0.000094 |
M | 175 | T175T | acG | acT | 2 | 6 | B.1.526 | 0.000047 |
M | 175 | T175M | aCg | aTg | 6 | 6 | P.1 | 0.000095 |
M | 175 | T175T | acG | acT | 3 | 5 | AY.100 | 0.000138 |
M | 175 | T175T | acG | acA | 2 | 5 | AY.100 | 0.000092 |
M | 175 | T175T | acG | acA | 5 | 5 | AY.121 | 0.000677 |
M | 175 | T175M | aCg | aTg | 5 | 5 | AY.32 | 0.002662 |
M | 175 | T175M | aCg | aTg | 5 | 5 | AY.42 | 0.000201 |
M | 175 | T175M | aCg | aTg | 5 | 5 | AY.54 | 0.000477 |
M | 175 | T175T | acG | acA | 5 | 5 | AY.62 | 0.002179 |
M | 175 | T175M | aCg | aTg | 5 | 5 | AY.98 | 0.000395 |
M | 175 | T175T | acG | acT | 5 | 5 | B.1.1.159 | 0.023364 |
M | 175 | T175T | acG | acT | 3 | 5 | B.1.1.306 | 0.001315 |
M | 175 | T175T | acG | acA | 2 | 5 | B.1.1.306 | 0.000877 |
M | 175 | T175M | aCg | aTg | 5 | 5 | B.1.221 | 0.000355 |
M | 175 | T175T | acG | acA | 5 | 5 | B.1.575 | 0.001517 |
M | 175 | T175T | acG | acA | 4 | 4 | AD.2 | 0.000876 |
M | 175 | T175N | aCG | aAT | 4 | 4 | All | 0.000001 |
M | 175 | T175R | aCg | aGg | 4 | 4 | All | 0.000001 |
M | 175 | T175del1 | acG | ac- | 3 | 4 | All | 0.000001 |
M | 175 | T175L | ACg | TTg | 3 | 4 | All | 0.000001 |
M | 175 | T175L | ACG | TTA | 1 | 4 | All | 0 |
M | 175 | T175del1 | ACg | -Tg | 1 | 4 | All | 0 |
M | 175 | T175T | acG | acT | 4 | 4 | AY.106 | 0.00134 |
M | 175 | T175M | aCg | aTg | 4 | 4 | AY.106 | 0.00134 |
M | 175 | T175T | acG | acT | 3 | 4 | AY.120 | 0.000112 |
M | 175 | T175T | acG | acC | 1 | 4 | AY.120 | 0.000037 |
M | 175 | T175T | acG | acA | 3 | 4 | AY.40 | 0.002893 |
M | 175 | T175T | acG | acT | 1 | 4 | AY.40 | 0.000964 |
M | 175 | T175T | acG | acT | 4 | 4 | AY.42 | 0.000161 |
M | 175 | T175N | aCG | aAT | 4 | 4 | AY.44 | 0.000024 |
M | 175 | T175T | acG | acT | 3 | 4 | AY.45 | 0.000365 |
M | 175 | T175T | acG | acA | 1 | 4 | AY.45 | 0.000122 |
M | 175 | T175T | acG | acT | 4 | 4 | AY.49 | 0.01278 |
M | 175 | T175T | acG | acT | 4 | 4 | AY.55 | 0.00367 |
M | 175 | T175T | acG | acA | 4 | 4 | AY.67 | 0.001857 |
M | 175 | T175T | acG | acT | 2 | 4 | AY.7.1 | 0.000225 |
M | 175 | T175T | acG | acC | 1 | 4 | AY.7.1 | 0.000113 |
M | 175 | T175T | acG | acA | 1 | 4 | AY.7.1 | 0.000113 |
M | 175 | T175M | aCg | aTg | 4 | 4 | AY.9.2 | 0.000147 |
M | 175 | T175T | acG | acA | 3 | 4 | AY.95 | 0.002283 |
M | 175 | T175T | acG | acT | 1 | 4 | AY.95 | 0.000761 |
M | 175 | T175T | acG | acA | 2 | 4 | B.1.1.318 | 0.000604 |
M | 175 | T175T | acG | acT | 2 | 4 | B.1.1.318 | 0.000604 |
M | 175 | T175K | aCg | aAg | 4 | 4 | B.1.1.7 | 0.000004 |
M | 175 | T175M | aCg | aTg | 4 | 4 | B.1.177.57 | 0.001124 |
M | 175 | T175M | aCg | aTg | 4 | 4 | B.1.427 | 0.000202 |
M | 175 | T175M | aCg | aTg | 4 | 4 | B.1.509 | 0.003463 |
M | 175 | T175T | acG | acT | 4 | 4 | B.1.525 | 0.000453 |
M | 175 | T175M | aCg | aTg | 4 | 4 | R.1 | 0.00036 |
M | 175 | T175T | acG | acA | 3 | 3 | A.2 | 0.001985 |
M | 175 | T175I | aCG | aTT | 3 | 3 | All | 0.000001 |
M | 175 | T175T | acG | acC | 3 | 3 | AY.10 | 0.00159 |
M | 175 | T175T | acG | acA | 3 | 3 | AY.110 | 0.000338 |
M | 175 | T175M | aCg | aTg | 3 | 3 | AY.114 | 0.000693 |
M | 175 | T175M | aCg | aTg | 3 | 3 | AY.116.1 | 0.000934 |
M | 175 | T175T | acG | acT | 2 | 3 | AY.119 | 0.000071 |
M | 175 | T175T | acG | acA | 1 | 3 | AY.119 | 0.000035 |
M | 175 | T175M | aCg | aTg | 3 | 3 | AY.120 | 0.000112 |
M | 175 | T175T | acG | acA | 3 | 3 | AY.39.1 | 0.000119 |
M | 175 | T175M | aCg | aTg | 3 | 3 | AY.46.4 | 0.000494 |
M | 175 | T175M | aCg | aTg | 3 | 3 | AY.47 | 0.000093 |
M | 175 | T175T | acG | acT | 2 | 3 | AY.53 | 0.000575 |
M | 175 | T175T | acG | acA | 1 | 3 | AY.53 | 0.000288 |
M | 175 | T175T | acG | acA | 3 | 3 | AY.59 | 0.001589 |
M | 175 | T175M | aCg | aTg | 3 | 3 | AY.9 | 0.000203 |
M | 175 | T175T | acG | acT | 3 | 3 | B.1.1.308 | 0.035294 |
M | 175 | T175T | acG | acT | 2 | 3 | B.1.1.39 | 0.001019 |
M | 175 | T175T | acG | acA | 1 | 3 | B.1.1.39 | 0.00051 |
M | 175 | T175T | acG | acT | 3 | 3 | B.1.1.432 | 0.003797 |
M | 175 | T175M | aCg | aTg | 3 | 3 | B.1.160 | 0.000094 |
M | 175 | T175T | acG | acT | 3 | 3 | B.1.167 | 0.023438 |
M | 175 | T175T | acG | acA | 2 | 3 | B.1.192 | 0.018519 |
M | 175 | T175T | acG | acT | 1 | 3 | B.1.192 | 0.009259 |
M | 175 | T175T | acG | acT | 3 | 3 | B.1.214.2 | 0.001799 |
M | 175 | T175M | aCg | aTg | 3 | 3 | B.1.234 | 0.000396 |
M | 175 | T175T | acG | acT | 3 | 3 | B.1.258.17 | 0.000312 |
M | 175 | T175M | aCg | aTg | 3 | 3 | B.1.36 | 0.000438 |
M | 175 | T175T | acG | acT | 2 | 3 | B.1.524 | 0.002813 |
M | 175 | T175T | acG | acA | 1 | 3 | B.1.524 | 0.001406 |
M | 175 | T175M | aCg | aTg | 3 | 3 | D.2 | 0.000225 |
M | 175 | T175T | acG | acT | 3 | 3 | P.1.12 | 0.001452 |
M | 175 | T175M | aCg | aTg | 3 | 3 | P.1.14 | 0.000143 |
M | 175 | T175M | aCg | aTg | 3 | 3 | P.1.15 | 0.000697 |
M | 175 | T175S | Acg | Tcg | 2 | 2 | All | 0 |
M | 175 | T175P | Acg | Ccg | 1 | 2 | All | 0 |
M | 175 | T175P | AcG | CcT | 1 | 2 | All | 0 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.100 | 0.000092 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.111 | 0.000366 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.117 | 0.000169 |
M | 175 | T175T | acG | acA | 2 | 2 | AY.14 | 0.000176 |
M | 175 | T175T | acG | acC | 2 | 2 | AY.19 | 0.002281 |
M | 175 | T175T | acG | acA | 2 | 2 | AY.23.1 | 0.000835 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.29.1 | 0.000441 |
M | 175 | T175T | acG | acC | 1 | 2 | AY.34 | 0.000097 |
M | 175 | T175T | acG | acA | 1 | 2 | AY.34 | 0.000097 |
M | 175 | T175K | aCg | aAg | 2 | 2 | AY.4 | 0.000003 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.4.2 | 0.000043 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.4.2.1 | 0.000298 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.4.2.1 | 0.000298 |
M | 175 | T175R | aCg | aGg | 2 | 2 | AY.44 | 0.000012 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.45 | 0.000243 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.46 | 0.000208 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.46 | 0.000208 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.46.3 | 0.001867 |
M | 175 | T175T | acG | acA | 2 | 2 | AY.5.3 | 0.000675 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.57 | 0.001312 |
M | 175 | T175T | acG | acA | 1 | 2 | AY.6 | 0.000041 |
M | 175 | T175T | acG | acT | 1 | 2 | AY.6 | 0.000041 |
M | 175 | T175M | aCg | aTg | 2 | 2 | AY.62 | 0.000871 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.9.1 | 0.000167 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.9.2 | 0.000073 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.93 | 0.000546 |
M | 175 | T175T | acG | acT | 2 | 2 | AY.98 | 0.000158 |
M | 175 | T175del | ACG | --- | 2 | 2 | B.1 | 0.000018 |
M | 175 | T175K | aCg | aAg | 2 | 2 | B.1 | 0.000018 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.1.192 | 0.004619 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.1.214 | 0.000111 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.1.218 | 0.015385 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.1.222 | 0.000408 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.1.284 | 0.000215 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.1.311 | 0.000716 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.1.311 | 0.000716 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.1.348 | 0.001592 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.1.355 | 0.030769 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.1.404 | 0.031746 |
M | 175 | T175T | acG | acA | 1 | 2 | B.1.1.63 | 0.000386 |
M | 175 | T175T | acG | acT | 1 | 2 | B.1.1.63 | 0.000386 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.160.18 | 0.014599 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.177.81 | 0.000379 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.177.81 | 0.000379 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.258 | 0.000133 |
M | 175 | T175T | acG | acT | 1 | 2 | B.1.260 | 0.003344 |
M | 175 | T175T | acG | acA | 1 | 2 | B.1.260 | 0.003344 |
M | 175 | T175T | acG | acC | 2 | 2 | B.1.330 | 0.057143 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.336 | 0.004878 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.351.2 | 0.000605 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.351.2 | 0.000605 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.36 | 0.000292 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.36.10 | 0.009569 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.36.10 | 0.009569 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.428 | 0.002041 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.576 | 0.001813 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.612 | 0.005305 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.620 | 0.001892 |
M | 175 | T175M | aCg | aTg | 2 | 2 | B.1.621 | 0.000177 |
M | 175 | T175T | acG | acT | 2 | 2 | B.1.628 | 0.000705 |
M | 175 | T175T | acG | acA | 2 | 2 | B.1.93 | 0.001867 |
M | 175 | T175M | aCg | aTg | 2 | 2 | C.35 | 0.001548 |
M | 175 | T175M | aCg | aTg | 2 | 2 | C.36.3 | 0.001134 |
M | 175 | T175T | acG | acA | 2 | 2 | C.37 | 0.000232 |
M | 175 | T175T | acG | acA | 1 | 2 | D.2 | 0.000075 |
M | 175 | T175T | acG | acC | 1 | 2 | D.2 | 0.000075 |
M | 175 | T175T | acG | acA | 1 | 2 | N.5 | 0.001767 |
M | 175 | T175T | acG | acT | 1 | 2 | N.5 | 0.001767 |
M | 175 | T175T | acG | acA | 2 | 2 | Q.8 | 0.00033 |
M | 175 | T175M | aCg | aTg | 1 | 1 | A | 0.000387 |
M | 175 | T175T | acG | acT | 1 | 1 | A | 0.000387 |
M | 175 | T175T | acG | acA | 1 | 1 | A.19 | 0.009434 |
M | 175 | T175M | aCg | aTg | 1 | 1 | A.2 | 0.000662 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AE.8 | 0.000489 |
M | 175 | T175del2 | aCG | a-- | 1 | 1 | All | 0 |
M | 175 | T175V | ACG | GTA | 1 | 1 | All | 0 |
M | 175 | T175del1 | acG | ac- | 1 | 1 | AY.100 | 0.000046 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.101 | 0.00049 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.101 | 0.00049 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.109 | 0.00074 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.109 | 0.00074 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.113 | 0.000142 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.116 | 0.000287 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.117 | 0.000085 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.118 | 0.000063 |
M | 175 | T175del1 | acG | ac- | 1 | 1 | AY.119 | 0.000035 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.120 | 0.000037 |
M | 175 | T175T | acG | acC | 1 | 1 | AY.120.1 | 0.000321 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.120.2 | 0.001285 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.121 | 0.000135 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.13 | 0.000161 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.15 | 0.002222 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.16 | 0.00038 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.20 | 0.000039 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.21 | 0.001898 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.22 | 0.002092 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.23 | 0.00007 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.23 | 0.00007 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.24 | 0.000431 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | AY.25 | 0.000006 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.25 | 0.000006 |
M | 175 | T175del | ACG | --- | 1 | 1 | AY.26 | 0.000028 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.26 | 0.000028 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.27 | 0.000065 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.29.1 | 0.000221 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | AY.3 | 0.00001 |
M | 175 | T175I | aCG | aTT | 1 | 1 | AY.3 | 0.00001 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | AY.30 | 0.000396 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.32 | 0.000532 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.34 | 0.000097 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.36 | 0.000148 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.36 | 0.000148 |
M | 175 | T175R | aCg | aGg | 1 | 1 | AY.39.1 | 0.00004 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | AY.4 | 0.000002 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.4.5 | 0.000107 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | AY.4.5 | 0.000107 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.4.5 | 0.000107 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.43 | 0.000004 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | AY.44 | 0.000006 |
M | 175 | T175del2 | aCG | a-- | 1 | 1 | AY.44 | 0.000006 |
M | 175 | T175del1 | acG | ac- | 1 | 1 | AY.44 | 0.000006 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.45 | 0.000122 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.46.4 | 0.000165 |
M | 175 | T175K | aCg | aAg | 1 | 1 | AY.5 | 0.000021 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.5.2 | 0.002463 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.51 | 0.000909 |
M | 175 | T175T | acG | acA | 1 | 1 | AY.58 | 0.000907 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.60 | 0.000938 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.64 | 0.000595 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.65 | 0.000533 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.68 | 0.000274 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.69 | 0.000187 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.7 | 0.000196 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.71 | 0.000475 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.72 | 0.001361 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.74 | 0.000116 |
M | 175 | T175del | ACG | --- | 1 | 1 | AY.75 | 0.000056 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.75.1 | 0.00018 |
M | 175 | T175T | acG | acT | 1 | 1 | AY.75.1 | 0.00018 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.84 | 0.000437 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.91 | 0.00073 |
M | 175 | T175M | aCg | aTg | 1 | 1 | AY.93 | 0.000273 |
M | 175 | T175T | acG | acA | 1 | 1 | B | 0.000128 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | B.1 | 0.000009 |
M | 175 | T175L | ACG | TTA | 1 | 1 | B.1.1 | 0.000018 |
M | 175 | T175I | aCG | aTT | 1 | 1 | B.1.1 | 0.000018 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.1.1 | 0.000327 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.10 | 0.001115 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.1.10 | 0.001115 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.161 | 0.003534 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.174 | 0.003378 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.220 | 0.001859 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.1.240 | 0.004695 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.256 | 0.013699 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.268 | 0.014925 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.28 | 0.000311 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.1.28 | 0.000311 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.284 | 0.000107 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.1.294 | 0.001266 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.1.302 | 0.002075 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.1.317 | 0.000412 |
M | 175 | T175T | acG | acC | 1 | 1 | B.1.1.33 | 0.000421 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.33 | 0.000421 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.356 | 0.008547 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.369 | 0.000446 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.1.409 | 0.002833 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.419 | 0.007407 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.420 | 0.001006 |
M | 175 | T175del | ACG | --- | 1 | 1 | B.1.1.420 | 0.001006 |
M | 175 | T175del | ACG | --- | 1 | 1 | B.1.1.448 | 0.002033 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.462 | 0.008621 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.464 | 0.001473 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.481 | 0.071429 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.525 | 0.005464 |
M | 175 | T175L | ACg | TTg | 1 | 1 | B.1.1.7 | 0.000001 |
M | 175 | T175I | aCG | aTT | 1 | 1 | B.1.1.7 | 0.000001 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | B.1.1.7 | 0.000001 |
M | 175 | T175del1 | ACg | -Tg | 1 | 1 | B.1.1.7 | 0.000001 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.70 | 0.000341 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.71 | 0.006061 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.1.8 | 0.003584 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.111 | 0.001175 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.146 | 0.004237 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.147 | 0.000756 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | B.1.177 | 0.000013 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.16 | 0.000664 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.177.20 | 0.001517 |
M | 175 | T175V | ACG | GTA | 1 | 1 | B.1.177.21 | 0.000076 |
M | 175 | T175P | AcG | CcT | 1 | 1 | B.1.177.21 | 0.000076 |
M | 175 | T175L | ACg | TTg | 1 | 1 | B.1.177.21 | 0.000076 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.32 | 0.00135 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.4 | 0.000211 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.46 | 0.000918 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.177.51 | 0.004566 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.52 | 0.001757 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.177.56 | 0.000668 |
M | 175 | T175K | aCg | aAg | 1 | 1 | B.1.177.56 | 0.000668 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.177.59 | 0.016129 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.62 | 0.001192 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.65 | 0.000665 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.177.65 | 0.000665 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.177.72 | 0.00339 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.177.82 | 0.000477 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.177.83 | 0.001481 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.177.86 | 0.000183 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.189 | 0.004292 |
M | 175 | T175S | Acg | Tcg | 1 | 1 | B.1.2 | 0.000009 |
M | 175 | T175K | aCg | aAg | 1 | 1 | B.1.2 | 0.000009 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.201 | 0.005682 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.206 | 0.000816 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | B.1.234 | 0.000132 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.234 | 0.000132 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.241 | 0.000812 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.242 | 0.018868 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.243 | 0.00007 |
M | 175 | T175L | ACg | TTg | 1 | 1 | B.1.258.11 | 0.000396 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.258.17 | 0.000104 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.258.22 | 0.002667 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.265 | 0.001271 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.279 | 0.000514 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.338 | 0.008621 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.36.16 | 0.001425 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.36.17 | 0.000494 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.36.22 | 0.001208 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.36.38 | 0.001642 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.361 | 0.001289 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.362 | 0.001541 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.369 | 0.000285 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.375 | 0.00082 |
M | 175 | T175del | ACG | --- | 1 | 1 | B.1.377 | 0.004566 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.389 | 0.001002 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.404 | 0.001302 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.409 | 0.000781 |
M | 175 | T175del | ACG | --- | 1 | 1 | B.1.427 | 0.00005 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.433 | 0.003195 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.497 | 0.000315 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.516 | 0.001957 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.517 | 0.000427 |
M | 175 | T175A | Acg | Gcg | 1 | 1 | B.1.525 | 0.000113 |
M | 175 | T175K | aCg | aAg | 1 | 1 | B.1.526 | 0.000024 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.551 | 0.00129 |
M | 175 | T175R | aCg | aGg | 1 | 1 | B.1.564 | 0.000426 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.564 | 0.000426 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.588 | 0.00091 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.609 | 0.000479 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.617.1 | 0.000129 |
M | 175 | T175P | Acg | Ccg | 1 | 1 | B.1.617.2 | 0.000004 |
M | 175 | T175T | acG | acA | 1 | 1 | B.1.619 | 0.000871 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.621 | 0.000089 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.628 | 0.000352 |
M | 175 | T175T | acG | acT | 1 | 1 | B.1.9.4 | 0.006135 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.1.91 | 0.002075 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.28 | 0.003279 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.3 | 0.000831 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.3.1 | 0.001658 |
M | 175 | T175S | Acg | Tcg | 1 | 1 | B.3.1 | 0.001658 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.39 | 0.002331 |
M | 175 | T175M | aCg | aTg | 1 | 1 | B.4 | 0.002208 |
M | 175 | T175T | acG | acA | 1 | 1 | B.6 | 0.00091 |
M | 175 | T175T | acG | acT | 1 | 1 | B.6.6 | 0.000889 |
M | 175 | T175T | acG | acT | 1 | 1 | C.14 | 0.004329 |
M | 175 | T175T | acG | acA | 1 | 1 | C.16 | 0.00106 |
M | 175 | T175T | acG | acT | 1 | 1 | C.30 | 0.001727 |
M | 175 | T175T | acG | acT | 1 | 1 | N.4 | 0.004255 |
M | 175 | T175M | aCg | aTg | 1 | 1 | P.1.13 | 0.000898 |
M | 175 | T175T | acG | acA | 1 | 1 | P.1.15 | 0.000232 |
M | 175 | T175M | aCg | aTg | 1 | 1 | P.1.4 | 0.000977 |
M | 175 | T175M | aCg | aTg | 1 | 1 | P.1.6 | 0.001946 |
M | 175 | T175T | acG | acT | 1 | 1 | P.1.7 | 0.000319 |
M | 175 | T175M | aCg | aTg | 1 | 1 | P.3 | 0.001595 |
M | 175 | T175T | acG | acT | 1 | 1 | P.6 | 0.003145 |
M | 175 | T175T | acG | acT | 1 | 1 | Q.1 | 0.000126 |
M | 175 | T175M | aCg | aTg | 1 | 1 | Q.2 | 0.000613 |
M | 175 | T175T | acG | acA | 1 | 1 | Q.2 | 0.000613 |
M | 175 | T175M | aCg | aTg | 1 | 1 | Q.8 | 0.000165 |
M | 175 | T175M | aCg | aTg | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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