CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : CodonNum = 129 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M129L129LsynctGctA956518270.19100926907-26909

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M129L129LctGctA18279565All0.000349
M129L129LctGctA15353658AY.40.002389
M129L129LctGctA251741B.1.1.70.000022
M129L129LctGctA9289AY.30.00009
M129L129LctGctA29276B.1.617.20.000109
M129L129LctGctA117244AY.430.000518
M129L129LctGctA1179AY.440.000006
M129L129LctGctA1174P.10.000016
M129L129LctGctA2162B.1.20.000018
M129L129LctGctA3124AY.250.000018
M129L129LctGctA1104B.1.1770.000013
M129L129LctGctA392B.10.000027
M129L129LctGctA784B.1.4290.000165
M129L129LctGctA276AY.1180.000125
M129L129LctGctA1075B.1.5260.000235
M129L129LctGctA161B.1.10.000018
M129L129LctGctA152AY.39.10.00004
M129L129LctGctA147B.1.1.5190.00004
M129L129LctGctA140B.1.1.2140.000055
M129L129LctGctA133AY.390.000025
M129L129LctGctA230AY.290.000032
M129L129LctGctA2226B.1.617.10.002837
M129L129LctGctA1925AY.4.20.000412
M129L129LctGctA124AY.260.000028
M129L129LctGctA124B.1.1600.000031
M129L129LctGctA118AY.420.00004
M129L129LctGctA117B.1.2580.000067
M129L129LctGctA214AY.230.000139
M129L129LctGctA413C.370.000464
M129L129LctGctA512AY.1000.00023
M129L129LctGctA110P.1.120.000484
M129L129LctGctA17AY.530.000288
M129L129LctGctA27AY.90.000135
M129L129LctGctA16AY.740.000116
M129L129LctGctA15B.1.6210.000089
M129L129LctGctA14AY.4.50.000107
M129L129LctGctA13AY.70.000196
M129L129LctGctA33B.1.177.150.001893
M129L129LctGctA33B.1.619.10.001924
M129L129LctGctA12AY.1160.000287
M129L129LctGctA11B.1.177.620.001192
M129L129LctGctA11B.1.2220.001692
M129L129LctGctA11B.1.3800.006623
M129L129LctGctA11B.1.5610.000397