CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = M : CodonNum = 125 & Codon = Tat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
M	125	H125Y		nonsyn	Cat	Tat	8463	8443	0.997637	26895-26897

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
M	125	H125Y	Cat	Tat	8443	8463	All	0.001615
M	125	H125Y	Cat	Tat	2125	2139	B.1.1.7	0.001902
M	125	H125Y	Cat	Tat	665	665	AY.4	0.001035
M	125	H125Y	Cat	Tat	602	602	B.1.1.269	0.814614
M	125	H125Y	Cat	Tat	302	302	AY.25	0.001816
M	125	H125Y	Cat	Tat	293	294	B.1.2	0.00258
M	125	H125Y	Cat	Tat	287	287	B.1.617.2	0.001081
M	125	H125Y	Cat	Tat	271	271	B.1.177.72	0.918644
M	125	H125Y	Cat	Tat	247	247	AY.43	0.001094
M	125	H125Y	Cat	Tat	196	196	AV.1	0.989899
M	125	H125Y	Cat	Tat	166	167	B.1.177	0.002186
M	125	H125Y	Cat	Tat	128	128	B.1	0.001172
M	125	H125Y	Cat	Tat	117	117	AY.3	0.001164
M	125	H125Y	Cat	Tat	110	110	B.1.1.519	0.004368
M	125	H125Y	Cat	Tat	110	110	B.1.351	0.00327
M	125	H125Y	Cat	Tat	102	104	AY.44	0.000621
M	125	H125Y	Cat	Tat	93	93	B.1.177.82	0.044391
M	125	H125Y	Cat	Tat	89	89	AY.103	0.000553
M	125	H125Y	Cat	Tat	80	80	B.1.637	0.005846
M	125	H125Y	Cat	Tat	79	79	AY.98.1	0.003826
M	125	H125Y	Cat	Tat	77	77	B.1.160	0.002401
M	125	H125Y	Cat	Tat	73	73	AY.27	0.004725
M	125	H125Y	Cat	Tat	67	68	B.1.1	0.001215
M	125	H125Y	Cat	Tat	65	65	B.1.526	0.001528
M	125	H125Y	Cat	Tat	60	61	P.1	0.000945
M	125	H125Y	Cat	Tat	53	53	AY.6	0.00218
M	125	H125Y	Cat	Tat	50	50	B.1.36	0.007295
M	125	H125Y	Cat	Tat	50	50	B.1.609	0.023969
M	125	H125Y	Cat	Tat	49	49	AY.29	0.000773
M	125	H125Y	Cat	Tat	44	44	AY.114	0.010169
M	125	H125Y	Cat	Tat	43	43	B.1.1.482	1
M	125	H125Y	Cat	Tat	41	41	AY.5	0.000847
M	125	H125Y	Cat	Tat	41	41	B.1.616	1
M	125	H125Y	Cat	Tat	39	39	B.1.243	0.002714
M	125	H125Y	Cat	Tat	39	39	B.1.429	0.000918
M	125	H125Y	Cat	Tat	38	38	AY.33	0.002538
M	125	H125Y	Cat	Tat	38	38	AY.39	0.000939
M	125	H125Y	Cat	Tat	38	38	W.4	0.051351
M	125	H125Y	Cat	Tat	32	32	B.1.621	0.002833
M	125	H125Y	Cat	Tat	31	31	AY.4.2	0.000672
M	125	H125Y	Cat	Tat	29	29	B.1.1.214	0.001608
M	125	H125Y	Cat	Tat	28	28	AY.47	0.000871
M	125	H125Y	Cat	Tat	28	28	AY.75	0.001569
M	125	H125Y	Cat	Tat	28	28	B.1.221.3	0.023333
M	125	H125Y	Cat	Tat	26	26	AY.102	0.000689
M	125	H125Y	Cat	Tat	26	26	AY.61	0.002724
M	125	H125Y	Cat	Tat	23	23	AY.4.3	0.01936
M	125	H125Y	Cat	Tat	23	23	R.1	0.00207
M	125	H125Y	Cat	Tat	22	22	AY.100	0.001012
M	125	H125Y	Cat	Tat	21	21	B.1.258	0.001397
M	125	H125Y	Cat	Tat	20	20	AY.9.2	0.000735
M	125	H125Y	Cat	Tat	19	19	AY.26	0.000538
M	125	H125Y	Cat	Tat	19	19	B.1.258.17	0.001975
M	125	H125Y	Cat	Tat	19	19	C.37	0.002205
M	125	H125Y	Cat	Tat	18	18	B.1.628	0.006342
M	125	H125Y	Cat	Tat	18	18	D.2	0.001351
M	125	H125Y	Cat	Tat	18	18	Q.4	0.008186
M	125	H125Y	Cat	Tat	17	17	AY.99.2	0.001567
M	125	H125Y	Cat	Tat	17	17	B.1.234	0.002243
M	125	H125Y	Cat	Tat	17	17	B.1.427	0.000858
M	125	H125Y	Cat	Tat	16	16	AY.119	0.000565
M	125	H125Y	Cat	Tat	16	16	B.1.596	0.001394
M	125	H125Y	Cat	Tat	15	15	A	0.005805
M	125	H125Y	Cat	Tat	15	15	B.1.1.222	0.00306
M	125	H125Y	Cat	Tat	15	15	B.1.1.420	0.015091
M	125	H125Y	Cat	Tat	15	15	B.1.36.8	0.015
M	125	H125Y	Cat	Tat	14	14	AY.20	0.000544
M	125	H125Y	Cat	Tat	14	14	B.1.177.15	0.008833
M	125	H125Y	Cat	Tat	14	14	B.1.221	0.000994
M	125	H125Y	Cat	Tat	13	13	B.1.1.216	0.011576
M	125	H125Y	Cat	Tat	13	13	B.1.1.284	0.001396
M	125	H125Y	Cat	Tat	13	13	B.1.438.1	0.001394
M	125	H125Y	Cat	Tat	12	12	AY.117	0.001014
M	125	H125Y	Cat	Tat	12	12	AY.120	0.000446
M	125	H125Y	Cat	Tat	12	12	AY.39.1	0.000475
M	125	H125Y	Cat	Tat	12	12	Z.1	0.034682
M	125	H125Y	Cat	Tat	11	11	AY.93	0.003004
M	125	H125Y	Cat	Tat	11	11	B.1.1.39	0.005607
M	125	H125Y	Cat	Tat	11	11	B.1.525	0.001245
M	125	H125Y	Cat	Tat	10	10	AY.118	0.000626
M	125	H125Y	Cat	Tat	10	10	AY.50	0.007994
M	125	H125Y	Cat	Tat	10	10	B.1.1.25	0.005685
M	125	H125Y	Cat	Tat	9	9	AY.14	0.000792
M	125	H125Y	Cat	Tat	9	9	B.1.1.37	0.001736
M	125	H125Y	Cat	Tat	9	9	B.1.595	0.002349
M	125	H125Y	Cat	Tat	9	9	B.1.621.1	0.004552
M	125	H125Y	Cat	Tat	9	9	C.36	0.008197
M	125	H125Y	Cat	Tat	8	8	AY.38	0.003994
M	125	H125Y	Cat	Tat	8	8	AY.42	0.000322
M	125	H125Y	Cat	Tat	8	8	AY.70	0.001668
M	125	H125Y	Cat	Tat	8	8	B.1.1.318	0.002414
M	125	H125Y	Cat	Tat	8	8	B.1.177.7	0.001319
M	125	H125Y	Cat	Tat	8	8	B.1.177.81	0.001515
M	125	H125Y	Cat	Tat	8	8	B.1.600	0.046784
M	125	H125Y	Cat	Tat	8	8	Q.1	0.001011
M	125	H125Y	Cat	Tat	7	7	AY.41	0.002058
M	125	H125Y	Cat	Tat	7	7	B.1.177.44	0.003633
M	125	H125Y	Cat	Tat	7	7	B.1.177.86	0.001284
M	125	H125Y	Cat	Tat	7	7	B.1.36.29	0.003621
M	125	H125Y	Cat	Tat	7	7	B.1.456	0.022876
M	125	H125Y	Cat	Tat	7	7	B.1.551	0.009032
M	125	H125Y	Cat	Tat	7	7	P.1.4	0.006836
M	125	H125Y	Cat	Tat	6	6	AY.36	0.000889
M	125	H125Y	Cat	Tat	6	6	AY.9.2.1	0.011858
M	125	H125Y	Cat	Tat	6	6	AY.98	0.000474
M	125	H125Y	Cat	Tat	6	6	B	0.000767
M	125	H125Y	Cat	Tat	6	6	B.1.1.311	0.002149
M	125	H125Y	Cat	Tat	6	6	B.1.1.56	0.107143
M	125	H125Y	Cat	Tat	6	6	B.1.177.4	0.001266
M	125	H125Y	Cat	Tat	6	6	B.1.400	0.002574
M	125	H125Y	Cat	Tat	6	6	Q.8	0.000989
M	125	H125Y	Cat	Tat	5	5	AY.23	0.000349
M	125	H125Y	Cat	Tat	5	5	AY.4.5	0.000537
M	125	H125Y	Cat	Tat	5	5	AY.45	0.000608
M	125	H125Y	Cat	Tat	5	5	AY.54	0.000477
M	125	H125Y	Cat	Tat	5	5	AY.9	0.000338
M	125	H125Y	Cat	Tat	5	5	B.1.1.1	0.001633
M	125	H125Y	Cat	Tat	5	5	B.1.1.196	0.028571
M	125	H125Y	Cat	Tat	5	5	B.1.1.28	0.001556
M	125	H125Y	Cat	Tat	5	5	B.1.160.16	0.004647
M	125	H125Y	Cat	Tat	5	5	B.1.572	0.125
M	125	H125Y	Cat	Tat	5	5	B.1.575	0.001517
M	125	H125Y	Cat	Tat	5	5	B.1.577	0.003436
M	125	H125Y	Cat	Tat	5	5	B.1.623	0.002682
M	125	H125Y	Cat	Tat	5	5	C.30	0.008636
M	125	H125Y	Cat	Tat	5	5	P.2	0.000933
M	125	H125Y	Cat	Tat	4	4	AB.1	0.032787
M	125	H125Y	Cat	Tat	4	4	AY.62	0.001743
M	125	H125Y	Cat	Tat	4	4	AY.63	0.001547
M	125	H125Y	Cat	Tat	4	4	AY.73	0.002661
M	125	H125Y	Cat	Tat	4	4	AY.75.1	0.000721
M	125	H125Y	Cat	Tat	4	4	AY.77	0.00451
M	125	H125Y	Cat	Tat	4	4	B.1.1.434	0.001394
M	125	H125Y	Cat	Tat	4	4	B.1.346	0.005242
M	125	H125Y	Cat	Tat	4	4	B.40	0.001457
M	125	H125Y	Cat	Tat	4	4	P.1.14	0.000191
M	125	H125Y	Cat	Tat	4	4	P.1.2	0.004624
M	125	H125Y	Cat	Tat	4	4	P.1.7	0.001277
M	125	H125Y	Cat	Tat	3	3	AY.113	0.000427
M	125	H125Y	Cat	Tat	3	3	AY.116.1	0.000934
M	125	H125Y	Cat	Tat	3	3	AY.120.1	0.000963
M	125	H125Y	Cat	Tat	3	3	AY.13	0.000483
M	125	H125Y	Cat	Tat	3	3	AY.16.1	0.00141
M	125	H125Y	Cat	Tat	3	3	AY.34	0.000291
M	125	H125Y	Cat	Tat	3	3	AY.46.5	0.000595
M	125	H125Y	Cat	Tat	3	3	AY.59	0.001589
M	125	H125Y	Cat	Tat	3	3	AY.7	0.000588
M	125	H125Y	Cat	Tat	3	3	AY.74	0.000347
M	125	H125Y	Cat	Tat	3	3	AY.78	0.004622
M	125	H125Y	Cat	Tat	3	3	AY.84	0.001312
M	125	H125Y	Cat	Tat	3	3	AY.9.1	0.000251
M	125	H125Y	Cat	Tat	3	3	AY.92	0.000862
M	125	H125Y	Cat	Tat	3	3	B.1.1.117	0.029126
M	125	H125Y	Cat	Tat	3	3	B.1.1.157	0.00274
M	125	H125Y	Cat	Tat	3	3	B.1.1.231	0.009288
M	125	H125Y	Cat	Tat	3	3	B.1.1.326	0.005282
M	125	H125Y	Cat	Tat	3	3	B.1.1.41	0.018987
M	125	H125Y	Cat	Tat	3	3	B.1.104	0.01107
M	125	H125Y	Cat	Tat	3	3	B.1.111	0.003525
M	125	H125Y	Cat	Tat	3	3	B.1.160.32	0.012876
M	125	H125Y	Cat	Tat	3	3	B.1.177.20	0.004552
M	125	H125Y	Cat	Tat	3	3	B.1.177.21	0.000229
M	125	H125Y	Cat	Tat	3	3	B.1.177.32	0.004049
M	125	H125Y	Cat	Tat	3	3	B.1.177.73	0.001699
M	125	H125Y	Cat	Tat	3	3	B.1.177.8	0.002257
M	125	H125Y	Cat	Tat	3	3	B.1.177.84	0.02
M	125	H125Y	Cat	Tat	3	3	B.1.240	0.000647
M	125	H125Y	Cat	Tat	3	3	B.1.298	0.006342
M	125	H125Y	Cat	Tat	3	3	B.1.319	0.009146
M	125	H125Y	Cat	Tat	3	3	B.1.320	0.003736
M	125	H125Y	Cat	Tat	3	3	B.1.369	0.000856
M	125	H125Y	Cat	Tat	3	3	B.1.396	0.002117
M	125	H125Y	Cat	Tat	3	3	B.1.424	0.024194
M	125	H125Y	Cat	Tat	3	3	B.1.439	0.017751
M	125	H125Y	Cat	Tat	3	3	B.1.466.2	0.001174
M	125	H125Y	Cat	Tat	3	3	B.1.564	0.001278
M	125	H125Y	Cat	Tat	3	3	B.3	0.002492
M	125	H125Y	Cat	Tat	3	3	P.1.15	0.000697
M	125	H125Y	Cat	Tat	2	2	AE.8	0.000978
M	125	H125Y	Cat	Tat	2	2	AT.1	0.010256
M	125	H125Y	Cat	Tat	2	2	AY.1	0.000791
M	125	H125Y	Cat	Tat	2	2	AY.105	0.001286
M	125	H125Y	Cat	Tat	2	2	AY.116	0.000574
M	125	H125Y	Cat	Tat	2	2	AY.120.2.1	0.000997
M	125	H125Y	Cat	Tat	2	2	AY.21	0.003795
M	125	H125Y	Cat	Tat	2	2	AY.29.1	0.000441
M	125	H125Y	Cat	Tat	2	2	AY.3.1	0.000171
M	125	H125Y	Cat	Tat	2	2	AY.39.2	0.003082
M	125	H125Y	Cat	Tat	2	2	AY.40	0.001929
M	125	H125Y	Cat	Tat	2	2	AY.46	0.000208
M	125	H125Y	Cat	Tat	2	2	AY.46.1	0.002053
M	125	H125Y	Cat	Tat	2	2	AY.46.6	0.000144
M	125	H125Y	Cat	Tat	2	2	AY.65	0.001066
M	125	H125Y	Cat	Tat	2	2	AY.69	0.000373
M	125	H125Y	Cat	Tat	2	2	AY.71	0.00095
M	125	H125Y	Cat	Tat	2	2	AY.8	0.001212
M	125	H125Y	Cat	Tat	2	2	AY.85	0.000854
M	125	H125Y	Cat	Tat	2	2	AY.86	0.00166
M	125	H125Y	Cat	Tat	2	2	AY.87	0.001665
M	125	H125Y	Cat	Tat	2	2	B.1.1.242	0.086957
M	125	H125Y	Cat	Tat	2	2	B.1.1.265	0.006309
M	125	H125Y	Cat	Tat	2	2	B.1.1.301	0.002358
M	125	H125Y	Cat	Tat	2	2	B.1.1.372	0.001377
M	125	H125Y	Cat	Tat	2	2	B.1.1.413	0.013793
M	125	H125Y	Cat	Tat	2	2	B.1.1.432	0.002532
M	125	H125Y	Cat	Tat	2	2	B.1.1.44	0.004819
M	125	H125Y	Cat	Tat	2	2	B.1.1.50	0.001358
M	125	H125Y	Cat	Tat	2	2	B.1.177.10	0.001756
M	125	H125Y	Cat	Tat	2	2	B.1.177.5	0.002484
M	125	H125Y	Cat	Tat	2	2	B.1.177.6	0.001953
M	125	H125Y	Cat	Tat	2	2	B.1.177.60	0.000437
M	125	H125Y	Cat	Tat	2	2	B.1.199	0.008264
M	125	H125Y	Cat	Tat	2	2	B.1.258.4	0.006897
M	125	H125Y	Cat	Tat	2	2	B.1.326	0.015152
M	125	H125Y	Cat	Tat	2	2	B.1.332	0.006993
M	125	H125Y	Cat	Tat	2	2	B.1.349	0.00143
M	125	H125Y	Cat	Tat	2	2	B.1.356	0.003454
M	125	H125Y	Cat	Tat	2	2	B.1.362.2	0.009434
M	125	H125Y	Cat	Tat	2	2	B.1.405	0.024691
M	125	H125Y	Cat	Tat	2	2	B.1.413	0.008511
M	125	H125Y	Cat	Tat	2	2	B.1.422	0.001625
M	125	H125Y	Cat	Tat	2	2	B.1.576	0.001813
M	125	H125Y	Cat	Tat	2	2	B.1.587	0.003795
M	125	H125Y	Cat	Tat	2	2	B.1.617.1	0.000258
M	125	H125Y	Cat	Tat	2	2	B.1.627	0.00404
M	125	H125Y	Cat	Tat	2	2	B.1.91	0.004149
M	125	H125Y	Cat	Tat	2	2	C.18	0.005181
M	125	H125Y	Cat	Tat	2	2	C.35	0.001548
M	125	H125Y	Cat	Tat	2	2	P.1.1	0.000635
M	125	H125Y	Cat	Tat	2	2	Q.6	0.013245
M	125	H125Y	Cat	Tat	1	1	A.1	0.000282
M	125	H125Y	Cat	Tat	1	1	A.2	0.000662
M	125	H125Y	Cat	Tat	1	1	A.2.5	0.000499
M	125	H125Y	Cat	Tat	1	1	A.21	0.00277
M	125	H125Y	Cat	Tat	1	1	A.27	0.001656
M	125	H125Y	Cat	Tat	1	1	A.5	0.001923
M	125	H125Y	Cat	Tat	1	1	AA.2	0.007692
M	125	H125Y	Cat	Tat	1	1	AU.2	0.002421
M	125	H125Y	Cat	Tat	1	1	AY.110	0.000113
M	125	H125Y	Cat	Tat	1	1	AY.111	0.000183
M	125	H125Y	Cat	Tat	1	1	AY.16	0.00038
M	125	H125Y	Cat	Tat	1	1	AY.17	0.008197
M	125	H125Y	Cat	Tat	1	1	AY.19	0.00114
M	125	H125Y	Cat	Tat	1	1	AY.2	0.000356
M	125	H125Y	Cat	Tat	1	1	AY.23.1	0.000417
M	125	H125Y	Cat	Tat	1	1	AY.28	0.00189
M	125	H125Y	Cat	Tat	1	1	AY.30	0.000396
M	125	H125Y	Cat	Tat	1	1	AY.32	0.000532
M	125	H125Y	Cat	Tat	1	1	AY.35	0.000233
M	125	H125Y	Cat	Tat	1	1	AY.4.4	0.000409
M	125	H125Y	Cat	Tat	1	1	AY.46.3	0.000934
M	125	H125Y	Cat	Tat	1	1	AY.48	0.000465
M	125	H125Y	Cat	Tat	1	1	AY.5.2	0.002463
M	125	H125Y	Cat	Tat	1	1	AY.5.4	0.000277
M	125	H125Y	Cat	Tat	1	1	AY.52	0.000814
M	125	H125Y	Cat	Tat	1	1	AY.53	0.000288
M	125	H125Y	Cat	Tat	1	1	AY.56	0.001605
M	125	H125Y	Cat	Tat	1	1	AY.58	0.000907
M	125	H125Y	Cat	Tat	1	1	AY.7.1	0.000113
M	125	H125Y	Cat	Tat	1	1	AY.72	0.001361
M	125	H125Y	Cat	Tat	1	1	AY.91	0.00073
M	125	H125Y	Cat	Tat	1	1	AZ.1	0.000867
M	125	H125Y	Cat	Tat	1	1	B.1.1.153	0.001095
M	125	H125Y	Cat	Tat	1	1	B.1.1.163	0.007634
M	125	H125Y	Cat	Tat	1	1	B.1.1.164	0.005155
M	125	H125Y	Cat	Tat	1	1	B.1.1.174	0.003378
M	125	H125Y	Cat	Tat	1	1	B.1.1.186	0.003436
M	125	H125Y	Cat	Tat	1	1	B.1.1.207	0.001182
M	125	H125Y	Cat	Tat	1	1	B.1.1.220	0.001859
M	125	H125Y	Cat	Tat	1	1	B.1.1.227	0.004348
M	125	H125Y	Cat	Tat	1	1	B.1.1.277	0.000759
M	125	H125Y	Cat	Tat	1	1	B.1.1.286	0.002899
M	125	H125Y	Cat	Tat	1	1	B.1.1.291	0.000742
M	125	H125Y	Cat	Tat	1	1	B.1.1.302	0.002075
M	125	H125Y	Cat	Tat	1	1	B.1.1.306	0.000438
M	125	H125Y	Cat	Tat	1	1	B.1.1.316	0.000925
M	125	H125Y	Cat	Tat	1	1	B.1.1.317	0.000412
M	125	H125Y	Cat	Tat	1	1	B.1.1.322	0.008772
M	125	H125Y	Cat	Tat	1	1	B.1.1.329	0.003846
M	125	H125Y	Cat	Tat	1	1	B.1.1.33	0.000421
M	125	H125Y	Cat	Tat	1	1	B.1.1.348	0.000796
M	125	H125Y	Cat	Tat	1	1	B.1.1.366	0.015873
M	125	H125Y	Cat	Tat	1	1	B.1.1.377	0.001381
M	125	H125Y	Cat	Tat	1	1	B.1.1.380	0.009804
M	125	H125Y	Cat	Tat	1	1	B.1.1.381	0.04
M	125	H125Y	Cat	Tat	1	1	B.1.1.385	0.004464
M	125	H125Y	Cat	Tat	1	1	B.1.1.412	0.007634
M	125	H125Y	Cat	Tat	1	1	B.1.1.416	0.000905
M	125	H125Y	Cat	Tat	1	1	B.1.1.436	0.025641
M	125	H125Y	Cat	Tat	1	1	B.1.1.523	0.001563
M	125	H125Y	Cat	Tat	1	1	B.1.1.54	0.003021
M	125	H125Y	Cat	Tat	1	1	B.1.1.67	0.004566
M	125	H125Y	Cat	Tat	1	1	B.1.1.83	0.00271
M	125	H125Y	Cat	Tat	1	1	B.1.110.3	0.000718
M	125	H125Y	Cat	Tat	1	1	B.1.128	0.000635
M	125	H125Y	Cat	Tat	1	1	B.1.146	0.004237
M	125	H125Y	Cat	Tat	1	1	B.1.151	0.011111
M	125	H125Y	Cat	Tat	1	1	B.1.160.26	0.002421
M	125	H125Y	Cat	Tat	1	1	B.1.177.17	0.000821
M	125	H125Y	Cat	Tat	1	1	B.1.177.19	0.001431
M	125	H125Y	Cat	Tat	1	1	B.1.177.2	0.004545
M	125	H125Y	Cat	Tat	1	1	B.1.177.23	0.003236
M	125	H125Y	Cat	Tat	1	1	B.1.177.3	0.007634
M	125	H125Y	Cat	Tat	1	1	B.1.177.46	0.000918
M	125	H125Y	Cat	Tat	1	1	B.1.177.53	0.002392
M	125	H125Y	Cat	Tat	1	1	B.1.177.54	0.000606
M	125	H125Y	Cat	Tat	1	1	B.1.177.57	0.000281
M	125	H125Y	Cat	Tat	1	1	B.1.177.65	0.000665
M	125	H125Y	Cat	Tat	1	1	B.1.177.69	0.001484
M	125	H125Y	Cat	Tat	1	1	B.1.177.75	0.001041
M	125	H125Y	Cat	Tat	1	1	B.1.177.87	0.000728
M	125	H125Y	Cat	Tat	1	1	B.1.210	0.002132
M	125	H125Y	Cat	Tat	1	1	B.1.214.2	0.0006
M	125	H125Y	Cat	Tat	1	1	B.1.215	0.009615
M	125	H125Y	Cat	Tat	1	1	B.1.218	0.005155
M	125	H125Y	Cat	Tat	1	1	B.1.220	0.01087
M	125	H125Y	Cat	Tat	1	1	B.1.222	0.001692
M	125	H125Y	Cat	Tat	1	1	B.1.232	0.000537
M	125	H125Y	Cat	Tat	1	1	B.1.236	0.002053
M	125	H125Y	Cat	Tat	1	1	B.1.239	0.001221
M	125	H125Y	Cat	Tat	1	1	B.1.258.21	0.007752
M	125	H125Y	Cat	Tat	1	1	B.1.258.24	0.010753
M	125	H125Y	Cat	Tat	1	1	B.1.265	0.001271
M	125	H125Y	Cat	Tat	1	1	B.1.279	0.000514
M	125	H125Y	Cat	Tat	1	1	B.1.302	0.013333
M	125	H125Y	Cat	Tat	1	1	B.1.305	0.002151
M	125	H125Y	Cat	Tat	1	1	B.1.311	0.000275
M	125	H125Y	Cat	Tat	1	1	B.1.321	0.034483
M	125	H125Y	Cat	Tat	1	1	B.1.355	0.011111
M	125	H125Y	Cat	Tat	1	1	B.1.36.18	0.00042
M	125	H125Y	Cat	Tat	1	1	B.1.36.34	0.021277
M	125	H125Y	Cat	Tat	1	1	B.1.367	0.000792
M	125	H125Y	Cat	Tat	1	1	B.1.377	0.004566
M	125	H125Y	Cat	Tat	1	1	B.1.428	0.00102
M	125	H125Y	Cat	Tat	1	1	B.1.429.1	0.012048
M	125	H125Y	Cat	Tat	1	1	B.1.468	0.005714
M	125	H125Y	Cat	Tat	1	1	B.1.469	0.00361
M	125	H125Y	Cat	Tat	1	1	B.1.486	0.111111
M	125	H125Y	Cat	Tat	1	1	B.1.497	0.000315
M	125	H125Y	Cat	Tat	1	1	B.1.499	0.00105
M	125	H125Y	Cat	Tat	1	1	B.1.509	0.000866
M	125	H125Y	Cat	Tat	1	1	B.1.517	0.000427
M	125	H125Y	Cat	Tat	1	1	B.1.523	0.002451
M	125	H125Y	Cat	Tat	1	1	B.1.524	0.001406
M	125	H125Y	Cat	Tat	1	1	B.1.539	0.017544
M	125	H125Y	Cat	Tat	1	1	B.1.560	0.00463
M	125	H125Y	Cat	Tat	1	1	B.1.565	0.00081
M	125	H125Y	Cat	Tat	1	1	B.1.582	0.000491
M	125	H125Y	Cat	Tat	1	1	B.1.588	0.00091
M	125	H125Y	Cat	Tat	1	1	B.1.595.3	0.026316
M	125	H125Y	Cat	Tat	1	1	B.1.598	0.016949
M	125	H125Y	Cat	Tat	1	1	B.1.599	0.00365
M	125	H125Y	Cat	Tat	1	1	B.1.620	0.000946
M	125	H125Y	Cat	Tat	1	1	B.39	0.002331
M	125	H125Y	Cat	Tat	1	1	B.4	0.002208
M	125	H125Y	Cat	Tat	1	1	B.4.7	0.010101
M	125	H125Y	Cat	Tat	1	1	B.55	0.00295
M	125	H125Y	Cat	Tat	1	1	N.5	0.001767
M	125	H125Y	Cat	Tat	1	1	P.1.10	0.000269
M	125	H125Y	Cat	Tat	1	1	P.1.13	0.000898
M	125	H125Y	Cat	Tat	1	1	P.1.17	0.000162
M	125	H125Y	Cat	Tat	1	1	P.1.8	0.004785
M	125	H125Y	Cat	Tat	1	1	P.3	0.001595
M	125	H125Y	Cat	Tat	1	1	Q.7	0.001111

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.