CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : CodonNum = 100 & Codon = tCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M100F100SnonsyntTctCc92890.96739126820-26822

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M100F100StTctCc8992All0.000017
M100F100StTctCc1717B.1.20.00015
M100F100StTctCc1313B.1.1.70.000012
M100F100StTctCc1112AY.40.000017
M100F100StTctCc66B.1.5960.000523
M100F100StTctCc66B.1.617.20.000023
M100F100StTctCc24B.1.10.000036
M100F100StTctCc44P.1.140.000191
M100F100StTctCc33AY.30.00003
M100F100StTctCc33B.1.1.2160.002671
M100F100StTctCc33B.1.258.170.000312
M100F100StTctCc220.111111
M100F100StTctCc22B.10.000018
M100F100StTctCc22B.1.2400.000431
M100F100StTctCc22P.10.000032
M100F100StTctCc11A.2.50.000499
M100F100StTctCc11AY.1170.000085
M100F100StTctCc11AY.140.000088
M100F100StTctCc11AY.20.000356
M100F100StTctCc11AY.290.000016
M100F100StTctCc11AY.4.20.000022
M100F100StTctCc11AY.430.000004
M100F100StTctCc11AY.440.000006
M100F100StTctCc11AY.470.000031
M100F100StTctCc11B.1.1.2220.000204
M100F100StTctCc11B.1.1.3060.000438
M100F100StTctCc11B.1.1.3170.000412
M100F100StTctCc11B.1.1.330.000421