CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = V49L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E49V49LnonsynGtgTtg265426450.99660926389-26391
E49V49LnonsynGtgCtg265490.0033911126389-26391

Details of the mutation V49L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E49V49LGtgTtg26452654All0.000506
E49V49LGtgCtg92654All0.000002
E49V49LGtgTtg668671B.1.1.70.000598
E49V49LGtgCtg3671B.1.1.70.000003
E49V49LGtgTtg435435AY.30.004327
E49V49LGtgTtg237238AY.40.000369
E49V49LGtgCtg1238AY.40.000002
E49V49LGtgTtg184184B.1.5900.836364
E49V49LGtgTtg159160B.1.20.0014
E49V49LGtgCtg1160B.1.20.000009
E49V49LGtgTtg102102B.1.617.20.000384
E49V49LGtgTtg9595AY.330.006344
E49V49LGtgTtg5454AY.1030.000335
E49V49LGtgTtg4649B.10.000421
E49V49LGtgCtg349B.10.000027
E49V49LGtgTtg4343B.1.10.00078
E49V49LGtgTtg3131AY.430.000137
E49V49LGtgTtg3131B.1.1.5190.001231
E49V49LGtgTtg2727B.1.36.290.013968
E49V49LGtgTtg2525P.10.000394
E49V49LGtgTtg2323AY.440.00014
E49V49LGtgTtg2020AY.1200.000744
E49V49LGtgTtg2020AY.470.000622
E49V49LGtgTtg1919AY.9.20.000698
E49V49LGtgTtg1515B.1.5260.000353
E49V49LGtgTtg1515Q.80.002474
E49V49LGtgTtg1414AY.50.000289
E49V49LGtgTtg1313AY.1170.001099
E49V49LGtgTtg1313B.1.36.230.213115
E49V49LGtgTtg1212AY.90.000811
E49V49LGtgTtg1111AY.1020.000292
E49V49LGtgTtg910B.1.1770.000119
E49V49LGtgCtg110B.1.1770.000013
E49V49LGtgTtg1010B.1.177.570.00281
E49V49LGtgTtg1010B.1.2400.002156
E49V49LGtgTtg99AY.200.00035
E49V49LGtgTtg99AY.390.000222
E49V49LGtgTtg99B.1.1.5230.014063
E49V49LGtgTtg88AY.250.000048
E49V49LGtgTtg88AY.4.20.000174
E49V49LGtgTtg88AY.680.00219
E49V49LGtgTtg88B.1.4290.000188
E49V49LGtgTtg88B.1.466.20.00313
E49V49LGtgTtg88P.1.70.002554
E49V49LGtgTtg88P.20.001493
E49V49LGtgTtg77B.1.4270.000353
E49V49LGtgTtg66AY.210.011385
E49V49LGtgTtg66AY.60.000247
E49V49LGtgTtg66AY.99.20.000553
E49V49LGtgTtg55AY.100.00265
E49V49LGtgTtg55AY.1140.001156
E49V49LGtgTtg55AY.290.000079
E49V49LGtgTtg55AY.420.000201
E49V49LGtgTtg55AY.740.000578
E49V49LGtgTtg55AY.750.00028
E49V49LGtgTtg55B.1.1600.000156
E49V49LGtgTtg55B.1.258.170.00052
E49V49LGtgTtg44AY.1000.000184
E49V49LGtgTtg44AY.140.000352
E49V49LGtgTtg44AY.620.001743
E49V49LGtgTtg44B.1.5950.001044
E49V49LGtgTtg44B.1.617.10.000516
E49V49LGtgTtg33AY.1100.000338
E49V49LGtgTtg33AY.230.000209
E49V49LGtgTtg33AY.260.000085
E49V49LGtgTtg33AY.3.10.000256
E49V49LGtgTtg33AY.920.000862
E49V49LGtgTtg33B.1.1.2160.002671
E49V49LGtgTtg33B.1.177.120.000455
E49V49LGtgTtg33B.1.360.000438
E49V49LGtgTtg33B.1.3980.008929
E49V49LGtgTtg33B.1.4650.011407
E49V49LGtgTtg220.111111
E49V49LGtgTtg22AD.20.000438
E49V49LGtgTtg22AY.1130.000285
E49V49LGtgTtg22AY.1180.000125
E49V49LGtgTtg22AY.20.000712
E49V49LGtgTtg22AY.300.000791
E49V49LGtgTtg22AY.610.00021
E49V49LGtgTtg22AY.650.001066
E49V49LGtgTtg22AY.690.000373
E49V49LGtgTtg22B0.000256
E49V49LGtgTtg22B.1.1.280.000622
E49V49LGtgTtg22B.1.177.730.001133
E49V49LGtgTtg22B.1.438.10.000215
E49V49LGtgTtg22B.1.5960.000174
E49V49LGtgTtg22B.1.6370.000146
E49V49LGtgTtg22D.20.00015
E49V49LGtgTtg22P.1.170.000324
E49V49LGtgTtg22P.30.00319
E49V49LGtgTtg11A0.000387
E49V49LGtgTtg11A.2.50.000499
E49V49LGtgTtg11AY.1010.00049
E49V49LGtgTtg11AY.1050.000643
E49V49LGtgTtg11AY.1060.000335
E49V49LGtgTtg11AY.1070.000466
E49V49LGtgTtg11AY.1190.000035
E49V49LGtgTtg11AY.1210.000135
E49V49LGtgTtg11AY.160.00038
E49V49LGtgTtg11AY.320.000532
E49V49LGtgTtg11AY.340.000097
E49V49LGtgTtg11AY.350.000233
E49V49LGtgTtg11AY.39.10.00004
E49V49LGtgTtg11AY.4.50.000107
E49V49LGtgTtg11AY.450.000122
E49V49LGtgTtg11AY.460.000104
E49V49LGtgTtg11AY.46.40.000165
E49V49LGtgTtg11AY.480.000465
E49V49LGtgTtg11AY.5.30.000337
E49V49LGtgTtg11AY.540.000095
E49V49LGtgTtg11AY.590.00053
E49V49LGtgTtg11AY.700.000209
E49V49LGtgTtg11AY.710.000475
E49V49LGtgTtg11AY.75.10.00018
E49V49LGtgTtg11AY.840.000437
E49V49LGtgTtg11AY.850.000427
E49V49LGtgTtg11AY.9.10.000084
E49V49LGtgTtg11AY.930.000273
E49V49LGtgTtg11AY.98.10.000048
E49V49LGtgTtg11B.1.1.10.000327
E49V49LGtgTtg11B.1.1.1480.008772
E49V49LGtgTtg11B.1.1.1760.000439
E49V49LGtgTtg11B.1.1.2220.000204
E49V49LGtgTtg11B.1.1.2260.005814
E49V49LGtgTtg11B.1.1.2940.001266
E49V49LGtgTtg11B.1.1.3260.001761
E49V49LGtgTtg11B.1.1.330.000421
E49V49LGtgTtg11B.1.1.3720.000689
E49V49LGtgTtg11B.1.130.002375
E49V49LGtgTtg11B.1.160.150.00495
E49V49LGtgTtg11B.1.160.220.006757
E49V49LGtgTtg11B.1.177.160.000664
E49V49LGtgTtg11B.1.177.440.000519
E49V49LGtgTtg11B.1.177.600.000218
E49V49LGtgTtg11B.1.177.650.000665
E49V49LGtgTtg11B.1.177.80.000752
E49V49LGtgTtg11B.1.2140.003663
E49V49LGtgTtg11B.1.2470.014925
E49V49LGtgTtg11B.1.258.70.001912
E49V49LGtgTtg11B.1.2890.00266
E49V49LGtgTtg11B.1.3490.000715
E49V49LGtgTtg11B.1.3510.00003
E49V49LGtgTtg11B.1.36.160.001425
E49V49LGtgTtg11B.1.36.220.001208
E49V49LGtgTtg11B.1.3810.007812
E49V49LGtgTtg11B.1.3960.000706
E49V49LGtgTtg11B.1.4160.001269
E49V49LGtgTtg11B.1.416.10.001563
E49V49LGtgTtg11B.1.4280.00102
E49V49LGtgTtg11B.1.4560.003268
E49V49LGtgTtg11B.1.4700.001404
E49V49LGtgTtg11B.1.5820.000491
E49V49LGtgTtg11B.1.6210.000089
E49V49LGtgTtg11C.10.002392
E49V49LGtgTtg11C.350.000774
E49V49LGtgTtg11C.360.000911
E49V49LGtgTtg11P.1.10.20.041667
E49V49LGtgTtg11P.1.120.000484
E49V49LGtgTtg11P.1.150.000232
E49V49LGtgTtg11R.10.00009