CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = V25V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E25V25VsyngtAgtG354333900.95681626317-26319
E25V25VsyngtAgtT35431250.035280826317-26319
E25V25VsyngtAgtC3543280.0079029126317-26319

Details of the mutation V25V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E25V25VgtAgtG33903543All0.000648
E25V25VgtAgtT1253543All0.000024
E25V25VgtAgtC283543All0.000005
E25V25VgtAgtG957957B.1.3890.958918
E25V25VgtAgtG791818AY.40.001231
E25V25VgtAgtC14818AY.40.000022
E25V25VgtAgtT13818AY.40.00002
E25V25VgtAgtG218232B.1.1.70.000195
E25V25VgtAgtT14232B.1.1.70.000013
E25V25VgtAgtG222222B.1.6280.078224
E25V25VgtAgtG205209B.10.001878
E25V25VgtAgtT4209B.10.000037
E25V25VgtAgtG9797AY.1030.000602
E25V25VgtAgtG7788B.1.617.20.00029
E25V25VgtAgtT1188B.1.617.20.000041
E25V25VgtAgtG7878B.1.20.000687
E25V25VgtAgtG7575AY.98.10.003632
E25V25VgtAgtG7070AY.4.50.007524
E25V25VgtAgtG6565C.36.30.036869
E25V25VgtAgtG3763AY.440.000225
E25V25VgtAgtT2663AY.440.000158
E25V25VgtAgtG4243AY.250.000253
E25V25VgtAgtT143AY.250.000006
E25V25VgtAgtG3434AY.1020.000901
E25V25VgtAgtG2728AY.430.00012
E25V25VgtAgtT128AY.430.000004
E25V25VgtAgtG2626AY.30.000259
E25V25VgtAgtG2021AY.390.000494
E25V25VgtAgtT121AY.390.000025
E25V25VgtAgtG1920B.1.10.000345
E25V25VgtAgtT120B.1.10.000018
E25V25VgtAgtG1819B.1.1770.000237
E25V25VgtAgtT119B.1.1770.000013
E25V25VgtAgtG1516AY.200.000583
E25V25VgtAgtT116AY.200.000039
E25V25VgtAgtG1213B.1.2580.000799
E25V25VgtAgtT113B.1.2580.000067
E25V25VgtAgtG1012AY.290.000158
E25V25VgtAgtC112AY.290.000016
E25V25VgtAgtT112AY.290.000016
E25V25VgtAgtG1010AY.470.000311
E25V25VgtAgtC810AY.850.003417
E25V25VgtAgtT110AY.850.000427
E25V25VgtAgtG110AY.850.000427
E25V25VgtAgtT1010B.400.003643
E25V25VgtAgtG610P.1.140.000287
E25V25VgtAgtT410P.1.140.000191
E25V25VgtAgtG99AY.4.20.000195
E25V25VgtAgtG99B.1.4290.000212
E25V25VgtAgtG99P.10.000142
E25V25VgtAgtG78AY.1000.000322
E25V25VgtAgtT18AY.1000.000046
E25V25VgtAgtG78AY.50.000145
E25V25VgtAgtC18AY.50.000021
E25V25VgtAgtG88AY.880.007073
E25V25VgtAgtG77AY.420.000282
E25V25VgtAgtG67AY.9.20.00022
E25V25VgtAgtT17AY.9.20.000037
E25V25VgtAgtG77B.1.177.770.005084
E25V25VgtAgtG66AY.1070.002796
E25V25VgtAgtG66B.1.1.2160.005343
E25V25VgtAgtG350.166667
E25V25VgtAgtT250.111111
E25V25VgtAgtG55AY.230.000349
E25V25VgtAgtG55B.1.1.2170.018182
E25V25VgtAgtT55B.1.1.2630.007788
E25V25VgtAgtG55B.1.1.3180.001509
E25V25VgtAgtG45B.1.6210.000354
E25V25VgtAgtC15B.1.6210.000089
E25V25VgtAgtG44B.1.1600.000125
E25V25VgtAgtG44B.1.4270.000202
E25V25VgtAgtG44B.1.5250.000453
E25V25VgtAgtG44B.1.5960.000349
E25V25VgtAgtG23AY.1130.000285
E25V25VgtAgtT13AY.1130.000142
E25V25VgtAgtG23AY.1180.000125
E25V25VgtAgtT13AY.1180.000063
E25V25VgtAgtG33AY.120.10.000963
E25V25VgtAgtG33AY.140.000264
E25V25VgtAgtG23AY.260.000057
E25V25VgtAgtT13AY.260.000028
E25V25VgtAgtG23AY.3.10.000171
E25V25VgtAgtT13AY.3.10.000085
E25V25VgtAgtG33AY.450.000365
E25V25VgtAgtG33AY.460.000312
E25V25VgtAgtG33AY.570.001969
E25V25VgtAgtG33AY.610.000314
E25V25VgtAgtG33AY.640.001786
E25V25VgtAgtG33AY.740.000347
E25V25VgtAgtG23AY.750.000112
E25V25VgtAgtT13AY.750.000056
E25V25VgtAgtG33AY.980.000237
E25V25VgtAgtT33B0.000383
E25V25VgtAgtG33B.1.2410.002435
E25V25VgtAgtG33B.1.2430.000209
E25V25VgtAgtG33B.1.36.290.001552
E25V25VgtAgtC23B.1.3620.003082
E25V25VgtAgtG13B.1.3620.001541
E25V25VgtAgtT23B.1.617.10.000258
E25V25VgtAgtG13B.1.617.10.000129
E25V25VgtAgtG33C.370.000348
E25V25VgtAgtG22A.10.000564
E25V25VgtAgtG22AY.1190.000071
E25V25VgtAgtG22AY.130.000322
E25V25VgtAgtT12AY.46.60.000072
E25V25VgtAgtG12AY.46.60.000072
E25V25VgtAgtG12AY.5.40.000277
E25V25VgtAgtT12AY.5.40.000277
E25V25VgtAgtG22AY.9.10.000167
E25V25VgtAgtT22AY.920.000575
E25V25VgtAgtG22B.1.1.2320.00363
E25V25VgtAgtG22B.1.1.4160.00181
E25V25VgtAgtG22B.1.1.4320.002532
E25V25VgtAgtG22B.1.1.5190.000079
E25V25VgtAgtG22B.1.177.150.001262
E25V25VgtAgtG22B.1.177.80.001505
E25V25VgtAgtT22B.1.2400.000431
E25V25VgtAgtT12B.1.3510.00003
E25V25VgtAgtG12B.1.3510.00003
E25V25VgtAgtG22B.1.4200.020833
E25V25VgtAgtT12B.1.466.20.000391
E25V25VgtAgtG12B.1.466.20.000391
E25V25VgtAgtG22B.1.5260.000047
E25V25VgtAgtG22P.1.120.000968
E25V25VgtAgtG22P.20.000373
E25V25VgtAgtG22Q.10.000253
E25V25VgtAgtG22R.10.00018
E25V25VgtAgtG11A0.000387
E25V25VgtAgtG11A.2.5.20.001572
E25V25VgtAgtG11AY.1010.00049
E25V25VgtAgtT11AY.1060.000335
E25V25VgtAgtG11AY.1140.000231
E25V25VgtAgtG11AY.120.000316
E25V25VgtAgtG11AY.1200.000037
E25V25VgtAgtG11AY.16.10.00047
E25V25VgtAgtG11AY.240.000431
E25V25VgtAgtG11AY.330.000067
E25V25VgtAgtG11AY.340.000097
E25V25VgtAgtG11AY.360.000148
E25V25VgtAgtC11AY.380.000499
E25V25VgtAgtG11AY.46.10.001027
E25V25VgtAgtG11AY.46.40.000165
E25V25VgtAgtT11AY.580.000907
E25V25VgtAgtG11AY.670.000464
E25V25VgtAgtG11AY.680.000274
E25V25VgtAgtG11AY.70.000196
E25V25VgtAgtG11AY.7.20.000559
E25V25VgtAgtG11AY.75.10.00018
E25V25VgtAgtG11AY.90.000068
E25V25VgtAgtG11AY.950.000761
E25V25VgtAgtG11AY.99.20.000092
E25V25VgtAgtG11B.1.1.10.000327
E25V25VgtAgtG11B.1.1.1340.011364
E25V25VgtAgtG11B.1.1.1380.006061
E25V25VgtAgtG11B.1.1.1760.000439
E25V25VgtAgtG11B.1.1.2070.001182
E25V25VgtAgtG11B.1.1.250.000569
E25V25VgtAgtG11B.1.1.3060.000438
E25V25VgtAgtG11B.1.1.3090.005848
E25V25VgtAgtG11B.1.1.310.066667
E25V25VgtAgtG11B.1.1.3170.000412
E25V25VgtAgtT11B.1.1.3260.001761
E25V25VgtAgtT11B.1.1.390.00051
E25V25VgtAgtG11B.1.1.4090.002833
E25V25VgtAgtG11B.1.1.4120.007634
E25V25VgtAgtG11B.1.1.4340.000349
E25V25VgtAgtT11B.1.1.500.000679
E25V25VgtAgtG11B.1.1.5250.005464
E25V25VgtAgtG11B.1.177.40.000211
E25V25VgtAgtG11B.1.1990.004132
E25V25VgtAgtG11B.1.2080.04
E25V25VgtAgtG11B.1.2210.000071
E25V25VgtAgtG11B.1.2930.0125
E25V25VgtAgtG11B.1.3460.001311
E25V25VgtAgtG11B.1.360.000146
E25V25VgtAgtG11B.1.36.10.00114
E25V25VgtAgtG11B.1.4090.000781
E25V25VgtAgtG11B.1.4280.00102
E25V25VgtAgtG11B.1.5030.002488
E25V25VgtAgtG11B.1.5950.000261
E25V25VgtAgtG11B.1.6000.005848
E25V25VgtAgtT11B.1.6090.000479
E25V25VgtAgtG11B.1.6270.00202
E25V25VgtAgtG11B.6.60.000889
E25V25VgtAgtT11B.610.005747
E25V25VgtAgtG11P.1.150.000232
E25V25VgtAgtG11P.1.170.000162