CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = P71S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E71P71SnonsynCctTct413841340.99903326455-26457
E71P71SnonsynCcTTcC413830.00072498826455-26457
E71P71SnonsynCcTTcA413810.00024166326455-26457

Details of the mutation P71S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E71P71SCctTct41344138All0.000791
E71P71SCcTTcC34138All0.000001
E71P71SCcTTcA14138All0
E71P71SCctTct964964B.1.2430.06708
E71P71SCctTct884884AY.40.001376
E71P71SCctTct745745B.1.5760.675431
E71P71SCctTct285285P.10.00449
E71P71SCctTct200200B.1.1.70.000179
E71P71SCctTct125125B.10.001145
E71P71SCctTct9898B.1.617.20.000369
E71P71SCctTct9696B.1.20.000845
E71P71SCctTct6767B.1.3630.87013
E71P71SCctTct4343AY.430.000191
E71P71SCctTct3737B.1.1.5190.001469
E71P71SCctTct3535AY.440.000213
E71P71SCctTct3333AY.39.10.001307
E71P71SCctTct3333AY.98.10.001598
E71P71SCctTct3333B.1.1990.136364
E71P71SCctTct1919AY.39.1.10.013768
E71P71SCctTct1919B.1.360.002772
E71P71SCctTct1616AY.250.000096
E71P71SCctTct1414AY.460.001457
E71P71SCctTct1414AY.490.044728
E71P71SCctTct1313B.1.5960.001133
E71P71SCctTct1212AY.75.10.002164
E71P71SCctTct1112B.1.2210.000781
E71P71SCcTTcC112B.1.2210.000071
E71P71SCctTct1212B.1.6370.000877
E71P71SCctTct1111B.1.4270.000555
E71P71SCctTct1111B.1.617.30.032836
E71P71SCctTct1010B.1.10.000181
E71P71SCctTct1010B.1.1770.000132
E71P71SCctTct99AY.30.00009
E71P71SCctTct99AY.46.40.001481
E71P71SCctTct99B.1.1.1890.013616
E71P71SCctTct88B.1.1.4340.002788
E71P71SCctTct88P.1.120.003872
E71P71SCctTct77AY.1020.000186
E71P71SCctTct77AY.1200.00026
E71P71SCctTct360.166667
E71P71SCcTTcC260.111111
E71P71SCcTTcA160.055556
E71P71SCctTct66A.2.50.002994
E71P71SCctTct66AY.1030.000037
E71P71SCctTct66AY.300.002374
E71P71SCctTct66B.1.177.810.001136
E71P71SCctTct66B.1.2850.545455
E71P71SCctTct55AY.1000.00023
E71P71SCctTct55AY.340.000485
E71P71SCctTct55AY.540.000477
E71P71SCctTct55B.1.1.630.001929
E71P71SCctTct55B.1.1600.000156
E71P71SCctTct55B.1.5260.000118
E71P71SCctTct55B.1.5610.001985
E71P71SCctTct55B.1.6210.000443
E71P71SCctTct44AY.450.000487
E71P71SCctTct44AY.60.000165
E71P71SCctTct44AY.980.000316
E71P71SCctTct44B.1.4290.000094
E71P71SCctTct44B.1.5950.001044
E71P71SCctTct44P.1.10.001271
E71P71SCctTct33AY.1160.00086
E71P71SCctTct33AY.470.000093
E71P71SCctTct33AY.50.000062
E71P71SCctTct33AY.700.000626
E71P71SCctTct33B.1.1.2140.000166
E71P71SCctTct33B.1.177.520.005272
E71P71SCctTct33B.1.3970.014563
E71P71SCctTct33B.1.621.10.001517
E71P71SCctTct33P.1.140.000143
E71P71SCctTct33Q.80.000495
E71P71SCctTct22A.40.025641
E71P71SCctTct22AY.1210.000271
E71P71SCctTct22AY.260.000057
E71P71SCctTct22AY.370.000632
E71P71SCctTct22AY.4.50.000215
E71P71SCctTct22AY.46.60.000144
E71P71SCctTct22AY.480.00093
E71P71SCctTct22AY.670.000929
E71P71SCctTct22AY.710.00095
E71P71SCctTct22AY.9.10.000167
E71P71SCctTct22B.1.1.2160.001781
E71P71SCctTct22B.1.1.3540.008772
E71P71SCctTct22B.1.2400.000431
E71P71SCctTct22B.1.258.170.000208
E71P71SCctTct22B.1.36.10.002281
E71P71SCctTct22B.1.4520.027397
E71P71SCctTct22B.1.4700.002809
E71P71SCctTct22B.1.4990.002101
E71P71SCctTct22B.1.780.017094
E71P71SCctTct22N.90.011905
E71P71SCctTct11A.10.000282
E71P71SCctTct11A.170.090909
E71P71SCctTct11A.90.045455
E71P71SCctTct11AY.1130.000142
E71P71SCctTct11AY.116.10.000311
E71P71SCctTct11AY.1190.000035
E71P71SCctTct11AY.200.000039
E71P71SCctTct11AY.270.000065
E71P71SCctTct11AY.290.000016
E71P71SCctTct11AY.330.000067
E71P71SCctTct11AY.390.000025
E71P71SCctTct11AY.410.000294
E71P71SCctTct11AY.420.00004
E71P71SCctTct11AY.550.000917
E71P71SCctTct11AY.650.000533
E71P71SCctTct11AY.70.000196
E71P71SCctTct11AY.7.10.000113
E71P71SCctTct11AY.840.000437
E71P71SCctTct11AY.850.000427
E71P71SCctTct11AY.90.000068
E71P71SCctTct11AY.900.000684
E71P71SCctTct11AY.920.000287
E71P71SCctTct11AY.99.20.000092
E71P71SCctTct11B.1.1.2260.005814
E71P71SCctTct11B.1.1.2340.012048
E71P71SCctTct11B.1.1.2550.00303
E71P71SCctTct11B.1.1.280.000311
E71P71SCctTct11B.1.1.2910.000742
E71P71SCctTct11B.1.1.2940.001266
E71P71SCctTct11B.1.1.3170.000412
E71P71SCctTct11B.1.1.4480.002033
E71P71SCctTct11B.1.177.460.000918
E71P71SCctTct11B.1.177.650.000665
E71P71SCctTct11B.1.177.820.000477
E71P71SCctTct11B.1.2320.000537
E71P71SCctTct11B.1.2340.000132
E71P71SCctTct11B.1.2370.004975
E71P71SCctTct11B.1.2580.000067
E71P71SCctTct11B.1.258.220.002667
E71P71SCctTct11B.1.3110.000275
E71P71SCctTct11B.1.3400.004292
E71P71SCctTct11B.1.3440.008197
E71P71SCctTct11B.1.3500.002933
E71P71SCctTct11B.1.3510.00003
E71P71SCctTct11B.1.36.180.00042
E71P71SCctTct11B.1.36.310.001751
E71P71SCctTct11B.1.5250.000113
E71P71SCctTct11B.1.5640.000426
E71P71SCctTct11B.1.5710.009709
E71P71SCctTct11B.1.5800.004065
E71P71SCctTct11B.1.5820.000491
E71P71SCctTct11B.1.6120.002653
E71P71SCctTct11B.1.617.10.000129
E71P71SCctTct11B.550.00295
E71P71SCctTct11C.370.000116
E71P71SCctTct11P.1.130.000898
E71P71SCctTct11P.1.150.000232
E71P71SCctTct11P.1.170.000162
E71P71SCctTct11Q.30.000145
E71P71SCctTct11R.10.00009