CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = P71P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E71P71PsynccTccA3783250.85978826455-26457
E71P71PsynccTccC378390.10317526455-26457
E71P71PsynccTccG378140.03703726455-26457

Details of the mutation P71P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E71P71PccTccA325378All0.000062
E71P71PccTccC39378All0.000007
E71P71PccTccG14378All0.000003
E71P71PccTccA297297AY.50.006133
E71P71PccTccC1021B.1.1.70.000009
E71P71PccTccG1021B.1.1.70.000009
E71P71PccTccA121B.1.1.70.000001
E71P71PccTccA1515B.1.617.20.000056
E71P71PccTccC45B.1.1770.000053
E71P71PccTccG15B.1.1770.000013
E71P71PccTccC44AY.250.000024
E71P71PccTccC34B.10.000027
E71P71PccTccA14B.10.000009
E71P71PccTccC230.111111
E71P71PccTccA130.055556
E71P71PccTccC33C.370.000348
E71P71PccTccC22AY.1030.000012
E71P71PccTccC22AY.470.000062
E71P71PccTccA22B.1.1.2650.006309
E71P71PccTccG22B.1.177.150.001262
E71P71PccTccC22P.10.000032
E71P71PccTccG11AY.10.000396
E71P71PccTccA11AY.1000.000046
E71P71PccTccC11AY.200.000039
E71P71PccTccA11AY.5.40.000277
E71P71PccTccA11AY.550.000917
E71P71PccTccA11AY.610.000105
E71P71PccTccC11B.1.10.000018
E71P71PccTccC11B.1.1.2220.000204
E71P71PccTccC11B.1.1.3690.000446
E71P71PccTccC11B.1.2210.000071
E71P71PccTccC11B.1.2340.000132
E71P71PccTccC11B.1.3560.001727
E71P71PccTccA11B.1.6210.000089
E71P71PccTccA11B.1.6270.00202
E71P71PccTccA11P.1.10.000318
E71P71PccTccA11P.20.000187