CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = P71L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E71P71LnonsyncCtcTt42213422060.99983426455-26457
E71P71LnonsyncCTcTA4221350.00011844726455-26457
E71P71LnonsyncCTcTC4221310.000023689426455-26457
E71P71LnonsynCCTTTA4221310.000023689426455-26457

Details of the mutation P71L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E71P71LcCtcTt4220642213All0.008072
E71P71LcCTcTA542213All0.000001
E71P71LcCTcTC142213All0
E71P71LCCTTTA142213All0
E71P71LcCtcTt3296832968B.1.3510.980024
E71P71LcCtcTt32473247B.1.351.20.982451
E71P71LcCtcTt16501650B.1.351.50.989209
E71P71LcCtcTt11301130B.1.351.30.990359
E71P71LcCtcTt698698B.10.006393
E71P71LcCtcTt389389B.1.1.70.000348
E71P71LcCtcTt203203AY.40.000316
E71P71LcCtcTt104104B.1.10.001887
E71P71LcCtcTt104104B.1.20.000916
E71P71LcCtcTt9797B.1.617.20.000365
E71P71LcCtcTt9393AY.30.000925
E71P71LcCtcTt8787P.10.001371
E71P71LcCtcTt4949AY.250.000295
E71P71LcCtcTt4747AY.440.000286
E71P71LcCtcTt4141AY.430.000182
E71P71LcCtcTt3636B.1.5260.000846
E71P71LcCtcTt3232AY.1030.000199
E71P71LcCtcTt3030B.1.1770.000395
E71P71LcCtcTt2929AY.290.000457
E71P71LcCtcTt2828AY.260.000793
E71P71LcCtcTt2828B.1.5540.123348
E71P71LcCtcTt2626B.1.6370.0019
E71P71LcCtcTt2525B.1.2210.001776
E71P71LcCtcTt2424B.1.4290.000565
E71P71LcCtcTt2323B.1.1700.099138
E71P71LcCtcTt2323B.1.36.170.011364
E71P71LcCtcTt2222B.1.351.10.846154
E71P71LcCtcTt2121B.1.6360.14094
E71P71LcCtcTt2020AY.330.001336
E71P71LcCtcTt1919AD.10.078189
E71P71LcCtcTt1919B.1.5950.004958
E71P71LcCtcTt1818AY.390.000445
E71P71LcCtcTt1818AY.750.001008
E71P71LcCtcTt1515B.1.1.1760.006591
E71P71LcCtcTt1515B.1.6200.014191
E71P71LcCtcTt1414AY.1200.000521
E71P71LcCtcTt1414B.1.1.5190.000556
E71P71LcCtcTt1414B.1.1600.000437
E71P71LcCtcTt1414C.370.001625
E71P71LcCtcTt1414P.1.140.000669
E71P71LcCtcTt1313B.1.1.30.113043
E71P71LcCtcTt1313B.1.5240.018284
E71P71LcCtcTt1212B.1.2430.000835
E71P71LcCtcTt1112B.1.6210.000974
E71P71LcCTcTA112B.1.6210.000089
E71P71LcCtcTt1111AY.410.003233
E71P71LcCtcTt1111AY.50.000227
E71P71LcCtcTt1111B.1.1.3980.035484
E71P71LcCtcTt1111B.1.5230.026961
E71P71LcCtcTt1010AY.4.20.000217
E71P71LcCtcTt1010B0.001278
E71P71LcCtcTt1010B.1.1.1860.034364
E71P71LcCtcTt1010B.1.1.370.001929
E71P71LcCtcTt1010B.1.221.30.008333
E71P71LcCtcTt1010B.1.5960.000871
E71P71LcCtcTt99B.1.2580.000599
E71P71LcCtcTt99B.1.258.170.000936
E71P71LcCtcTt99B.1.3110.002471
E71P71LcCtcTt88AY.200.000311
E71P71LcCtcTt88AY.98.10.000387
E71P71LcCtcTt88B.1.1.390.004077
E71P71LcCtcTt88B.1.177.210.000612
E71P71LcCtcTt88B.1.5610.003176
E71P71LcCtcTt78P.1.10.002224
E71P71LcCTcTA18P.1.10.000318
E71P71LcCtcTt88P.20.001493
E71P71LcCtcTt77AY.930.001912
E71P71LcCtcTt77B.1.1.280.002179
E71P71LcCtcTt77B.1.1.3110.002507
E71P71LcCtcTt77B.1.177.150.004416
E71P71LcCtcTt77B.1.36.360.004214
E71P71LcCtcTt77B.1.3960.00494
E71P71LcCtcTt77B.1.6020.045752
E71P71LcCtcTt77B.1.6090.003356
E71P71LcCtcTt360.166667
E71P71LCCTTTA160.055556
E71P71LcCTcTC160.055556
E71P71LcCTcTA160.055556
E71P71LcCtcTt66AY.1000.000276
E71P71LcCtcTt66AY.1190.000212
E71P71LcCtcTt66AY.420.000241
E71P71LcCtcTt66AY.470.000187
E71P71LcCtcTt56AY.610.000524
E71P71LcCTcTA16AY.610.000105
E71P71LcCtcTt66B.1.177.820.002864
E71P71LcCtcTt66B.1.2340.000792
E71P71LcCtcTt66C.300.010363
E71P71LcCtcTt55A0.001935
E71P71LcCtcTt55A.10.001409
E71P71LcCtcTt55AY.1020.000133
E71P71LcCtcTt55AY.450.000608
E71P71LcCtcTt55AY.46.60.000361
E71P71LcCtcTt55AY.980.000395
E71P71LcCtcTt55B.1.1.10.001633
E71P71LcCtcTt55B.1.1.2840.000537
E71P71LcCtcTt55B.1.1.4160.004525
E71P71LcCtcTt55B.1.350.042373
E71P71LcCtcTt55B.1.36.290.002587
E71P71LcCtcTt55B.1.3670.003962
E71P71LcCtcTt55R.10.00045
E71P71LcCtcTt44A.2.50.001996
E71P71LcCtcTt44AY.140.000352
E71P71LcCtcTt44AY.230.000279
E71P71LcCtcTt44AY.240.001724
E71P71LcCtcTt44AY.360.000593
E71P71LcCtcTt44AY.560.006421
E71P71LcCtcTt44AY.90.00027
E71P71LcCtcTt44B.1.1.2910.00297
E71P71LcCtcTt44B.1.1.3060.001754
E71P71LcCtcTt44B.1.177.570.001124
E71P71LcCtcTt44B.1.177.730.002265
E71P71LcCtcTt44B.1.4040.005208
E71P71LcCtcTt44B.1.438.10.000429
E71P71LcCtcTt44B.1.4700.005618
E71P71LcCtcTt44B.1.6230.002146
E71P71LcCtcTt44B.60.00364
E71P71LcCtcTt44N.50.007067
E71P71LcCtcTt44P.1.120.001936
E71P71LcCtcTt44P.1.150.000929
E71P71LcCtcTt44Q.30.00058
E71P71LcCtcTt33AD.20.000657
E71P71LcCtcTt33AY.116.10.000934
E71P71LcCtcTt33AY.340.000291
E71P71LcCtcTt33AY.590.001589
E71P71LcCtcTt33AY.9.20.00011
E71P71LcCtcTt33AY.99.20.000276
E71P71LcCtcTt33B.1.1.4090.008499
E71P71LcCtcTt33B.1.1.4200.003018
E71P71LcCtcTt33B.1.1.4320.003797
E71P71LcCtcTt33B.1.1.5070.026087
E71P71LcCtcTt33B.1.177.80.002257
E71P71LcCtcTt33B.1.2400.000647
E71P71LcCtcTt33B.1.360.000438
E71P71LcCtcTt33B.1.4270.000151
E71P71LcCtcTt33B.1.5490.021583
E71P71LcCtcTt33B.1.5820.001472
E71P71LcCtcTt33B.1.6190.002613
E71P71LcCtcTt33C.360.002732
E71P71LcCtcTt33D.20.000225
E71P71LcCtcTt33P.1.70.000958
E71P71LcCtcTt33Q.80.000495
E71P71LcCtcTt22AS.20.03125
E71P71LcCtcTt22AU.30.004219
E71P71LcCtcTt22AY.1130.000285
E71P71LcCtcTt22AY.1170.000169
E71P71LcCtcTt22AY.1210.000271
E71P71LcCtcTt22AY.160.000759
E71P71LcCtcTt22AY.280.003781
E71P71LcCtcTt22AY.300.000791
E71P71LcCtcTt22AY.460.000208
E71P71LcCtcTt22AY.550.001835
E71P71LcCtcTt22AY.680.000547
E71P71LcCtcTt22AY.7.10.000225
E71P71LcCtcTt22AY.920.000575
E71P71LcCtcTt22B.1.1.1350.00939
E71P71LcCtcTt22B.1.1.2100.011429
E71P71LcCtcTt22B.1.1.3170.000823
E71P71LcCtcTt22B.1.1.3180.000604
E71P71LcCtcTt22B.1.1.3720.001377
E71P71LcCtcTt22B.1.1.3970.004505
E71P71LcCtcTt22B.1.1.4340.000697
E71P71LcCtcTt22B.1.1.4870.011173
E71P71LcCtcTt22B.1.160.150.009901
E71P71LcCtcTt22B.1.177.310.022989
E71P71LcCtcTt22B.1.177.600.000437
E71P71LcCtcTt22B.1.177.650.001331
E71P71LcCtcTt22B.1.177.70.00033
E71P71LcCtcTt22B.1.177.810.000379
E71P71LcCtcTt22B.1.177.860.000367
E71P71LcCtcTt22B.1.214.20.001199
E71P71LcCtcTt22B.1.214.30.014286
E71P71LcCtcTt22B.1.36.80.002
E71P71LcCtcTt22B.1.3750.001639
E71P71LcCtcTt22B.1.4000.000858
E71P71LcCtcTt22B.1.4690.00722
E71P71LcCtcTt22B.1.4990.002101
E71P71LcCtcTt22B.1.5250.000226
E71P71LcCtcTt22B.1.619.10.001283
E71P71LcCtcTt12B.1.6270.00202
E71P71LcCTcTA12B.1.6270.00202
E71P71LcCtcTt22B.30.001661
E71P71LcCtcTt22B.400.000729
E71P71LcCtcTt22C.160.002121
E71P71LcCtcTt22C.36.30.001134
E71P71LcCtcTt22C.80.008929
E71P71LcCtcTt22P.1.160.000748
E71P71LcCtcTt22P.1.80.009569
E71P71LcCtcTt11A.20.000662
E71P71LcCtcTt11A.23.10.000704
E71P71LcCtcTt11A.270.001656
E71P71LcCtcTt11A.50.001923
E71P71LcCtcTt11AA.10.007246
E71P71LcCtcTt11AU.20.002421
E71P71LcCtcTt11AY.10.000396
E71P71LcCtcTt11AY.1060.000335
E71P71LcCtcTt11AY.1070.000466
E71P71LcCtcTt11AY.1100.000113
E71P71LcCtcTt11AY.1110.000183
E71P71LcCtcTt11AY.1180.000063
E71P71LcCtcTt11AY.29.10.000221
E71P71LcCtcTt11AY.3.10.000085
E71P71LcCtcTt11AY.34.10.00051
E71P71LcCtcTt11AY.380.000499
E71P71LcCtcTt11AY.39.10.00004
E71P71LcCtcTt11AY.4.2.10.000149
E71P71LcCtcTt11AY.4.40.000409
E71P71LcCtcTt11AY.4.50.000107
E71P71LcCtcTt11AY.46.20.000635
E71P71LcCtcTt11AY.46.30.000934
E71P71LcCtcTt11AY.46.50.000198
E71P71LcCtcTt11AY.5.40.000277
E71P71LcCtcTt11AY.520.000814
E71P71LcCtcTt11AY.540.000095
E71P71LcCtcTt11AY.60.000041
E71P71LcCtcTt11AY.620.000436
E71P71LcCtcTt11AY.630.000387
E71P71LcCtcTt11AY.730.000665
E71P71LcCtcTt11AY.740.000116
E71P71LcCtcTt11AY.75.10.00018
E71P71LcCtcTt11AY.9.10.000084
E71P71LcCtcTt11AY.960.002075
E71P71LcCtcTt11AZ.10.000867
E71P71LcCtcTt11B.1.1.1340.011364
E71P71LcCtcTt11B.1.1.1410.002012
E71P71LcCtcTt11B.1.1.1480.008772
E71P71LcCtcTt11B.1.1.1570.000913
E71P71LcCtcTt11B.1.1.1890.001513
E71P71LcCtcTt11B.1.1.1920.002309
E71P71LcCtcTt11B.1.1.1980.001468
E71P71LcCtcTt11B.1.1.2070.001182
E71P71LcCtcTt11B.1.1.2160.00089
E71P71LcCtcTt11B.1.1.2220.000204
E71P71LcCtcTt11B.1.1.2530.002506
E71P71LcCtcTt11B.1.1.2570.009709
E71P71LcCtcTt11B.1.1.3080.011765
E71P71LcCtcTt11B.1.1.3150.008475
E71P71LcCtcTt11B.1.1.330.000421
E71P71LcCtcTt11B.1.1.3540.004386
E71P71LcCtcTt11B.1.1.3690.000446
E71P71LcCtcTt11B.1.1.3700.012658
E71P71LcCtcTt11B.1.1.3750.011905
E71P71LcCtcTt11B.1.1.3890.006061
E71P71LcCtcTt11B.1.1.4620.008621
E71P71LcCtcTt11B.1.1.4640.001473
E71P71LcCtcTt11B.1.1.4850.016667
E71P71LcCtcTt11B.1.1.770.041667
E71P71LcCtcTt11B.1.1100.004525
E71P71LcCtcTt11B.1.110.30.000718
E71P71LcCtcTt11B.1.1260.001276
E71P71LcCtcTt11B.1.1280.000635
E71P71LcCtcTt11B.1.1470.000756
E71P71LcCtcTt11B.1.1570.002985
E71P71LcCtcTt11B.1.160.140.002119
E71P71LcCtcTt11B.1.160.320.004292
E71P71LcCtcTt11B.1.177.300.002513
E71P71LcCtcTt11B.1.177.40.000211
E71P71LcCtcTt11B.1.177.400.005155
E71P71LcCtcTt11B.1.177.450.000381
E71P71LcCtcTt11B.1.177.60.000977
E71P71LcCtcTt11B.1.177.700.005917
E71P71LcCtcTt11B.1.177.720.00339
E71P71LcCtcTt11B.1.177.870.000728
E71P71LcCtcTt11B.1.2050.02381
E71P71LcCtcTt11B.1.2180.005155
E71P71LcCtcTt11B.1.2320.000537
E71P71LcCtcTt11B.1.2360.002053
E71P71LcCtcTt11B.1.2370.004975
E71P71LcCtcTt11B.1.258.110.000396
E71P71LcCtcTt11B.1.258.30.001675
E71P71LcCtcTt11B.1.258.90.005
E71P71LcCtcTt11B.1.2600.003344
E71P71LcCtcTt11B.1.2890.00266
E71P71LcCtcTt11B.1.3200.001245
E71P71LcCtcTt11B.1.3350.010309
E71P71LcCtcTt11B.1.36.100.004785
E71P71LcCtcTt11B.1.36.180.00042
E71P71LcCtcTt11B.1.36.190.009259
E71P71LcCtcTt11B.1.36.20.010753
E71P71LcCtcTt11B.1.36.270.000763
E71P71LcCtcTt11B.1.36.390.002217
E71P71LcCtcTt11B.1.3610.001289
E71P71LcCtcTt11B.1.3620.001541
E71P71LcCtcTt11B.1.3690.000285
E71P71LcCtcTt11B.1.3810.007812
E71P71LcCtcTt11B.1.3900.010638
E71P71LcCtcTt11B.1.3910.001127
E71P71LcCtcTt11B.1.4010.008197
E71P71LcCtcTt11B.1.4210.007463
E71P71LcCtcTt11B.1.4260.001009
E71P71LcCtcTt11B.1.4590.004082
E71P71LcCtcTt11B.1.466.20.000391
E71P71LcCtcTt11B.1.4800.002488
E71P71LcCtcTt11B.1.5380.008065
E71P71LcCtcTt11B.1.5680.001111
E71P71LcCtcTt11B.1.5750.000303
E71P71LcCtcTt11B.1.5800.004065
E71P71LcCtcTt11B.1.5870.001898
E71P71LcCtcTt11B.1.6150.04
E71P71LcCtcTt11B.1.6280.000352
E71P71LcCtcTt11B.1.780.008547
E71P71LcCtcTt11B.390.002331
E71P71LcCtcTt11C.10.002392
E71P71LcCtcTt11P.1.20.001156
E71P71LcCtcTt11P.30.001595
E71P71LcCtcTt11Q.10.000126
E71P71LcCtcTt11Q.40.000455
E71P71LcCtcTt11W.40.001351