CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = L21del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E21L21del1delCtt-tt8788700.99088826305-26307
E21L21del1delctTct-87850.0056947626305-26307
E21L21del1delcTtc-t87810.0011389526305-26307
E21L21del1delCtT-tC87810.0011389526305-26307
E21L21del1delcTTc-N87810.0011389526305-26307

Details of the mutation L21del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E21L21del1Ctt-tt870878All0.000166
E21L21del1ctTct-5878All0.000001
E21L21del1cTTc-N1878All0
E21L21del1CtT-tC1878All0
E21L21del1cTtc-t1878All0
E21L21del1Ctt-tt710710B.1.5250.080344
E21L21del1Ctt-tt7777B.1.5230.188725
E21L21del1Ctt-tt2323B.1.177.210.001759
E21L21del1Ctt-tt2020B.1.1.70.000018
E21L21del1Ctt-tt66B.1.2210.000426
E21L21del1Ctt-tt66Q.40.002729
E21L21del1Ctt-tt55B.1.617.20.000019
E21L21del1cTTc-N13B.10.000009
E21L21del1Ctt-tt13B.10.000009
E21L21del1ctTct-13B.10.000009
E21L21del1Ctt-tt33B.1.3510.000089
E21L21del1Ctt-tt33B.1.4700.004213
E21L21del1Ctt-tt23P.10.000032
E21L21del1ctTct-13P.10.000016
E21L21del1Ctt-tt11AY.1190.000035
E21L21del1Ctt-tt11AY.200.000039
E21L21del1Ctt-tt11AY.230.00007
E21L21del1Ctt-tt11AY.240.000431
E21L21del1Ctt-tt11AY.250.000006
E21L21del1Ctt-tt11AY.30.00001
E21L21del1ctTct-11AY.34.10.00051
E21L21del1Ctt-tt11AY.390.000025
E21L21del1Ctt-tt11AY.440.000006
E21L21del1Ctt-tt11AY.46.60.000072
E21L21del1CtT-tC11B0.000128
E21L21del1Ctt-tt11B.1.10.000018
E21L21del1ctTct-11B.1.1.4090.002833
E21L21del1Ctt-tt11B.1.1.5190.00004
E21L21del1Ctt-tt11B.1.20.000009
E21L21del1Ctt-tt11B.1.2580.000067
E21L21del1cTtc-t11B.1.617.10.000129
E21L21del1Ctt-tt11C.360.000911
E21L21del1ctTct-11P.1.150.000232