CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : Mut = F20L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E20F20LnonsynttTttG4932460.49898626302-26304
E20F20LnonsynTttCtt4932360.47870226302-26304
E20F20LnonsynttTttA493100.02028426302-26304
E20F20LnonsynTtTCtC49310.002028426302-26304

Details of the mutation F20L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E20F20LttTttG246493All0.000047
E20F20LTttCtt236493All0.000045
E20F20LttTttA10493All0.000002
E20F20LTtTCtC1493All0
E20F20LttTttG192192AY.700.040033
E20F20LTttCtt124124B.1.177.40.026171
E20F20LttTttG4141B.1.6161
E20F20LTttCtt2929B.1.177.600.006335
E20F20LTttCtt915B.1.1.70.000008
E20F20LttTttG615B.1.1.70.000005
E20F20LTttCtt1111AY.390.000272
E20F20LttTttA911B.1.1770.000119
E20F20LTttCtt211B.1.1770.000026
E20F20LTttCtt66AY.250.000036
E20F20LTttCtt66B.1.617.20.000023
E20F20LTttCtt45AY.590.002119
E20F20LttTttG15AY.590.00053
E20F20LTttCtt55B.1.10.000091
E20F20LTttCtt55B.1.1.5190.000199
E20F20LTttCtt24AY.1030.000012
E20F20LttTttA14AY.1030.000006
E20F20LttTttG14AY.1030.000006
E20F20LTttCtt44B.10.000037
E20F20LTttCtt33AY.430.000013
E20F20LTtTCtC120.055556
E20F20LTttCtt120.055556
E20F20LTttCtt22AY.1020.000053
E20F20LTttCtt22AY.290.000032
E20F20LTttCtt22AY.4.2.10.000298
E20F20LTttCtt22B.1.20.000018
E20F20LTttCtt12B.1.5260.000024
E20F20LttTttG12B.1.5260.000024
E20F20LTttCtt11AY.30.00001
E20F20LttTttG11AY.330.000067
E20F20LTttCtt11AY.40.000002
E20F20LTttCtt11AY.440.000006
E20F20LTttCtt11AY.50.000021
E20F20LTttCtt11AY.610.000105
E20F20LTttCtt11AY.90.000068
E20F20LTttCtt11B.1.1.250.000569
E20F20LTttCtt11B.1.1.3170.000412
E20F20LTttCtt11B.1.1.4330.001425
E20F20LttTttG11B.1.2210.000071
E20F20LTttCtt11B.1.230.006061
E20F20LTttCtt11B.1.2430.00007
E20F20LTttCtt11B.1.3370.005587
E20F20LTttCtt11B.1.360.000146
E20F20LTttCtt11B.1.5150.014493
E20F20LTttCtt11B.1.5270.003704
E20F20LttTttG11B.1.5760.000907
E20F20LttTttG11P.10.000016
E20F20LTttCtt11P.1.150.000232