CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
E | 71 | P71L | nonsyn | cCt | cTt | 42213 | 42206 | 0.999834 | 26455-26457 | |
E | 71 | P71L | nonsyn | cCT | cTA | 42213 | 5 | 0.000118447 | 26455-26457 | |
E | 71 | P71L | nonsyn | cCT | cTC | 42213 | 1 | 0.0000236894 | 26455-26457 | |
E | 71 | P71L | nonsyn | CCT | TTA | 42213 | 1 | 0.0000236894 | 26455-26457 | |
E | 71 | P71S | nonsyn | Cct | Tct | 4138 | 4134 | 0.999033 | 26455-26457 | |
E | 71 | P71S | nonsyn | CcT | TcC | 4138 | 3 | 0.000724988 | 26455-26457 | |
E | 71 | P71S | nonsyn | CcT | TcA | 4138 | 1 | 0.000241663 | 26455-26457 | |
E | 71 | P71P | syn | ccT | ccA | 378 | 325 | 0.859788 | 26455-26457 | |
E | 71 | P71P | syn | ccT | ccC | 378 | 39 | 0.103175 | 26455-26457 | |
E | 71 | P71P | syn | ccT | ccG | 378 | 14 | 0.037037 | 26455-26457 | |
E | 71 | P71H | nonsyn | cCt | cAt | 339 | 337 | 0.9941 | 26455-26457 | |
E | 71 | P71H | nonsyn | cCT | cAC | 339 | 2 | 0.0058997 | 26455-26457 | |
E | 71 | P71R | nonsyn | cCt | cGt | 283 | 283 | 1 | 26455-26457 | |
E | 71 | P71F | nonsyn | CCT | TTC | 188 | 183 | 0.973404 | 26455-26457 | |
E | 71 | P71F | nonsyn | CCt | TTt | 188 | 5 | 0.0265957 | 26455-26457 | |
E | 71 | P71T | nonsyn | Cct | Act | 122 | 119 | 0.97541 | 26455-26457 | |
E | 71 | P71T | nonsyn | CcT | AcG | 122 | 3 | 0.0245902 | 26455-26457 | |
E | 71 | P71del | del | CCT | --- | 65 | 65 | 1 | 26455-26457 | |
E | 71 | P71V | nonsyn | CCT | GTA | 35 | 26 | 0.742857 | 26455-26457 | |
E | 71 | P71V | nonsyn | CCt | GTt | 35 | 9 | 0.257143 | 26455-26457 | |
E | 71 | P71A | nonsyn | Cct | Gct | 23 | 10 | 0.434783 | 26455-26457 | |
E | 71 | P71A | nonsyn | CcT | GcG | 23 | 9 | 0.391304 | 26455-26457 | |
E | 71 | P71A | nonsyn | CcT | GcA | 23 | 4 | 0.173913 | 26455-26457 | |
E | 71 | P71del1 | del | Cct | -ct | 9 | 4 | 0.444444 | 26455-26457 | |
E | 71 | P71del1 | del | cCT | cT- | 9 | 3 | 0.333333 | 26455-26457 | |
E | 71 | P71del1 | del | ccT | cc- | 9 | 1 | 0.111111 | 26455-26457 | |
E | 71 | P71del1 | del | CcT | -cN | 9 | 1 | 0.111111 | 26455-26457 | |
E | 71 | P71Y | nonsyn | CCt | TAt | 6 | 4 | 0.666667 | 26455-26457 | |
E | 71 | P71Y | nonsyn | CCT | TAC | 6 | 2 | 0.333333 | 26455-26457 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
E | 71 | P71L | cCt | cTt | 42206 | 42213 | All | 0.008072 |
E | 71 | P71L | cCT | cTA | 5 | 42213 | All | 0.000001 |
E | 71 | P71L | CCT | TTA | 1 | 42213 | All | 0 |
E | 71 | P71L | cCT | cTC | 1 | 42213 | All | 0 |
E | 71 | P71L | cCt | cTt | 32968 | 32968 | B.1.351 | 0.980024 |
E | 71 | P71S | Cct | Tct | 4134 | 4138 | All | 0.000791 |
E | 71 | P71S | CcT | TcC | 3 | 4138 | All | 0.000001 |
E | 71 | P71S | CcT | TcA | 1 | 4138 | All | 0 |
E | 71 | P71L | cCt | cTt | 3247 | 3247 | B.1.351.2 | 0.982451 |
E | 71 | P71L | cCt | cTt | 1650 | 1650 | B.1.351.5 | 0.989209 |
E | 71 | P71L | cCt | cTt | 1130 | 1130 | B.1.351.3 | 0.990359 |
E | 71 | P71S | Cct | Tct | 964 | 964 | B.1.243 | 0.06708 |
E | 71 | P71S | Cct | Tct | 884 | 884 | AY.4 | 0.001376 |
E | 71 | P71S | Cct | Tct | 745 | 745 | B.1.576 | 0.675431 |
E | 71 | P71L | cCt | cTt | 698 | 698 | B.1 | 0.006393 |
E | 71 | P71L | cCt | cTt | 389 | 389 | B.1.1.7 | 0.000348 |
E | 71 | P71P | ccT | ccA | 325 | 378 | All | 0.000062 |
E | 71 | P71P | ccT | ccC | 39 | 378 | All | 0.000007 |
E | 71 | P71P | ccT | ccG | 14 | 378 | All | 0.000003 |
E | 71 | P71H | cCt | cAt | 337 | 339 | All | 0.000064 |
E | 71 | P71H | cCT | cAC | 2 | 339 | All | 0 |
E | 71 | P71P | ccT | ccA | 297 | 297 | AY.5 | 0.006133 |
E | 71 | P71S | Cct | Tct | 285 | 285 | P.1 | 0.00449 |
E | 71 | P71R | cCt | cGt | 283 | 283 | All | 0.000054 |
E | 71 | P71L | cCt | cTt | 203 | 203 | AY.4 | 0.000316 |
E | 71 | P71S | Cct | Tct | 200 | 200 | B.1.1.7 | 0.000179 |
E | 71 | P71F | CCT | TTC | 183 | 188 | All | 0.000035 |
E | 71 | P71F | CCt | TTt | 5 | 188 | All | 0.000001 |
E | 71 | P71F | CCT | TTC | 179 | 180 | B.1.1.7 | 0.00016 |
E | 71 | P71F | CCt | TTt | 1 | 180 | B.1.1.7 | 0.000001 |
E | 71 | P71S | Cct | Tct | 125 | 125 | B.1 | 0.001145 |
E | 71 | P71T | Cct | Act | 119 | 122 | All | 0.000023 |
E | 71 | P71T | CcT | AcG | 3 | 122 | All | 0.000001 |
E | 71 | P71L | cCt | cTt | 104 | 104 | B.1.1 | 0.001887 |
E | 71 | P71L | cCt | cTt | 104 | 104 | B.1.2 | 0.000916 |
E | 71 | P71R | cCt | cGt | 102 | 102 | AY.3 | 0.001015 |
E | 71 | P71S | Cct | Tct | 98 | 98 | B.1.617.2 | 0.000369 |
E | 71 | P71L | cCt | cTt | 97 | 97 | B.1.617.2 | 0.000365 |
E | 71 | P71S | Cct | Tct | 96 | 96 | B.1.2 | 0.000845 |
E | 71 | P71L | cCt | cTt | 93 | 93 | AY.3 | 0.000925 |
E | 71 | P71L | cCt | cTt | 87 | 87 | P.1 | 0.001371 |
E | 71 | P71S | Cct | Tct | 67 | 67 | B.1.363 | 0.87013 |
E | 71 | P71del | CCT | --- | 65 | 65 | All | 0.000012 |
E | 71 | P71H | cCt | cAt | 63 | 63 | B.1.1.7 | 0.000056 |
E | 71 | P71L | cCt | cTt | 49 | 49 | AY.25 | 0.000295 |
E | 71 | P71R | cCt | cGt | 49 | 49 | B.1.617.2 | 0.000185 |
E | 71 | P71L | cCt | cTt | 47 | 47 | AY.44 | 0.000286 |
E | 71 | P71H | cCt | cAt | 46 | 46 | AY.43 | 0.000204 |
E | 71 | P71S | Cct | Tct | 43 | 43 | AY.43 | 0.000191 |
E | 71 | P71L | cCt | cTt | 41 | 41 | AY.43 | 0.000182 |
E | 71 | P71T | Cct | Act | 39 | 40 | B.1.1.7 | 0.000035 |
E | 71 | P71T | CcT | AcG | 1 | 40 | B.1.1.7 | 0.000001 |
E | 71 | P71S | Cct | Tct | 37 | 37 | B.1.1.519 | 0.001469 |
E | 71 | P71H | cCt | cAt | 36 | 36 | AY.4 | 0.000056 |
E | 71 | P71L | cCt | cTt | 36 | 36 | B.1.526 | 0.000846 |
E | 71 | P71V | CCT | GTA | 26 | 35 | All | 0.000005 |
E | 71 | P71V | CCt | GTt | 9 | 35 | All | 0.000002 |
E | 71 | P71S | Cct | Tct | 35 | 35 | AY.44 | 0.000213 |
E | 71 | P71S | Cct | Tct | 33 | 33 | AY.39.1 | 0.001307 |
E | 71 | P71S | Cct | Tct | 33 | 33 | AY.98.1 | 0.001598 |
E | 71 | P71S | Cct | Tct | 33 | 33 | B.1.199 | 0.136364 |
E | 71 | P71L | cCt | cTt | 32 | 32 | AY.103 | 0.000199 |
E | 71 | P71L | cCt | cTt | 30 | 30 | B.1.177 | 0.000395 |
E | 71 | P71L | cCt | cTt | 29 | 29 | AY.29 | 0.000457 |
E | 71 | P71L | cCt | cTt | 28 | 28 | AY.26 | 0.000793 |
E | 71 | P71L | cCt | cTt | 28 | 28 | B.1.554 | 0.123348 |
E | 71 | P71L | cCt | cTt | 26 | 26 | B.1.637 | 0.0019 |
E | 71 | P71R | cCt | cGt | 25 | 25 | AY.91 | 0.018262 |
E | 71 | P71L | cCt | cTt | 25 | 25 | B.1.221 | 0.001776 |
E | 71 | P71L | cCt | cTt | 24 | 24 | B.1.429 | 0.000565 |
E | 71 | P71A | Cct | Gct | 10 | 23 | All | 0.000002 |
E | 71 | P71A | CcT | GcG | 9 | 23 | All | 0.000002 |
E | 71 | P71A | CcT | GcA | 4 | 23 | All | 0.000001 |
E | 71 | P71L | cCt | cTt | 23 | 23 | B.1.170 | 0.099138 |
E | 71 | P71L | cCt | cTt | 23 | 23 | B.1.36.17 | 0.011364 |
E | 71 | P71H | cCt | cAt | 22 | 22 | AY.44 | 0.000134 |
E | 71 | P71L | cCt | cTt | 22 | 22 | B.1.351.1 | 0.846154 |
E | 71 | P71T | Cct | Act | 22 | 22 | B.1.617.2 | 0.000083 |
E | 71 | P71P | ccT | ccG | 10 | 21 | B.1.1.7 | 0.000009 |
E | 71 | P71P | ccT | ccC | 10 | 21 | B.1.1.7 | 0.000009 |
E | 71 | P71P | ccT | ccA | 1 | 21 | B.1.1.7 | 0.000001 |
E | 71 | P71L | cCt | cTt | 21 | 21 | B.1.636 | 0.14094 |
E | 71 | P71L | cCt | cTt | 20 | 20 | AY.33 | 0.001336 |
E | 71 | P71L | cCt | cTt | 19 | 19 | AD.1 | 0.078189 |
E | 71 | P71S | Cct | Tct | 19 | 19 | AY.39.1.1 | 0.013768 |
E | 71 | P71S | Cct | Tct | 19 | 19 | B.1.36 | 0.002772 |
E | 71 | P71L | cCt | cTt | 19 | 19 | B.1.595 | 0.004958 |
E | 71 | P71L | cCt | cTt | 18 | 18 | AY.39 | 0.000445 |
E | 71 | P71L | cCt | cTt | 18 | 18 | AY.75 | 0.001008 |
E | 71 | P71R | cCt | cGt | 18 | 18 | B.1.1.7 | 0.000016 |
E | 71 | P71H | cCt | cAt | 17 | 17 | B.1.617.2 | 0.000064 |
E | 71 | P71S | Cct | Tct | 16 | 16 | AY.25 | 0.000096 |
E | 71 | P71L | cCt | cTt | 15 | 15 | B.1.1.176 | 0.006591 |
E | 71 | P71P | ccT | ccA | 15 | 15 | B.1.617.2 | 0.000056 |
E | 71 | P71L | cCt | cTt | 15 | 15 | B.1.620 | 0.014191 |
E | 71 | P71L | cCt | cTt | 14 | 14 | AY.120 | 0.000521 |
E | 71 | P71S | Cct | Tct | 14 | 14 | AY.46 | 0.001457 |
E | 71 | P71S | Cct | Tct | 14 | 14 | AY.49 | 0.044728 |
E | 71 | P71L | cCt | cTt | 14 | 14 | B.1.1.519 | 0.000556 |
E | 71 | P71L | cCt | cTt | 14 | 14 | B.1.160 | 0.000437 |
E | 71 | P71L | cCt | cTt | 14 | 14 | C.37 | 0.001625 |
E | 71 | P71L | cCt | cTt | 14 | 14 | P.1.14 | 0.000669 |
E | 71 | P71H | cCt | cAt | 14 | 14 | R.1 | 0.00126 |
E | 71 | P71L | cCt | cTt | 13 | 13 | B.1.1.3 | 0.113043 |
E | 71 | P71L | cCt | cTt | 13 | 13 | B.1.524 | 0.018284 |
E | 71 | P71S | Cct | Tct | 13 | 13 | B.1.596 | 0.001133 |
E | 71 | P71S | Cct | Tct | 12 | 12 | AY.75.1 | 0.002164 |
E | 71 | P71T | Cct | Act | 12 | 12 | AY.92 | 0.003447 |
E | 71 | P71S | Cct | Tct | 11 | 12 | B.1.221 | 0.000781 |
E | 71 | P71S | CcT | TcC | 1 | 12 | B.1.221 | 0.000071 |
E | 71 | P71L | cCt | cTt | 12 | 12 | B.1.243 | 0.000835 |
E | 71 | P71L | cCt | cTt | 11 | 12 | B.1.621 | 0.000974 |
E | 71 | P71L | cCT | cTA | 1 | 12 | B.1.621 | 0.000089 |
E | 71 | P71S | Cct | Tct | 12 | 12 | B.1.637 | 0.000877 |
E | 71 | P71L | cCt | cTt | 11 | 11 | AY.41 | 0.003233 |
E | 71 | P71L | cCt | cTt | 11 | 11 | AY.5 | 0.000227 |
E | 71 | P71del | CCT | --- | 11 | 11 | B.1 | 0.000101 |
E | 71 | P71L | cCt | cTt | 11 | 11 | B.1.1.398 | 0.035484 |
E | 71 | P71S | Cct | Tct | 11 | 11 | B.1.427 | 0.000555 |
E | 71 | P71L | cCt | cTt | 11 | 11 | B.1.523 | 0.026961 |
E | 71 | P71S | Cct | Tct | 11 | 11 | B.1.617.3 | 0.032836 |
E | 71 | P71L | cCt | cTt | 10 | 10 | AY.4.2 | 0.000217 |
E | 71 | P71R | cCt | cGt | 10 | 10 | AY.43 | 0.000044 |
E | 71 | P71H | cCt | cAt | 10 | 10 | AY.98.1 | 0.000484 |
E | 71 | P71L | cCt | cTt | 10 | 10 | B | 0.001278 |
E | 71 | P71H | cCt | cAt | 10 | 10 | B.1 | 0.000092 |
E | 71 | P71S | Cct | Tct | 10 | 10 | B.1.1 | 0.000181 |
E | 71 | P71L | cCt | cTt | 10 | 10 | B.1.1.186 | 0.034364 |
E | 71 | P71L | cCt | cTt | 10 | 10 | B.1.1.37 | 0.001929 |
E | 71 | P71S | Cct | Tct | 10 | 10 | B.1.177 | 0.000132 |
E | 71 | P71L | cCt | cTt | 10 | 10 | B.1.221.3 | 0.008333 |
E | 71 | P71L | cCt | cTt | 10 | 10 | B.1.596 | 0.000871 |
E | 71 | P71del1 | Cct | -ct | 4 | 9 | All | 0.000001 |
E | 71 | P71del1 | cCT | cT- | 3 | 9 | All | 0.000001 |
E | 71 | P71del1 | ccT | cc- | 1 | 9 | All | 0 |
E | 71 | P71del1 | CcT | -cN | 1 | 9 | All | 0 |
E | 71 | P71H | cCt | cAt | 9 | 9 | AY.103 | 0.000056 |
E | 71 | P71R | cCt | cGt | 9 | 9 | AY.25 | 0.000054 |
E | 71 | P71S | Cct | Tct | 9 | 9 | AY.3 | 0.00009 |
E | 71 | P71R | cCt | cGt | 9 | 9 | AY.34 | 0.000873 |
E | 71 | P71S | Cct | Tct | 9 | 9 | AY.46.4 | 0.001481 |
E | 71 | P71S | Cct | Tct | 9 | 9 | B.1.1.189 | 0.013616 |
E | 71 | P71H | cCt | cAt | 9 | 9 | B.1.2 | 0.000079 |
E | 71 | P71L | cCt | cTt | 9 | 9 | B.1.258 | 0.000599 |
E | 71 | P71L | cCt | cTt | 9 | 9 | B.1.258.17 | 0.000936 |
E | 71 | P71L | cCt | cTt | 9 | 9 | B.1.311 | 0.002471 |
E | 71 | P71L | cCt | cTt | 8 | 8 | AY.20 | 0.000311 |
E | 71 | P71T | Cct | Act | 8 | 8 | AY.4 | 0.000012 |
E | 71 | P71R | cCt | cGt | 8 | 8 | AY.44 | 0.000049 |
E | 71 | P71L | cCt | cTt | 8 | 8 | AY.98.1 | 0.000387 |
E | 71 | P71L | cCt | cTt | 8 | 8 | B.1.1.39 | 0.004077 |
E | 71 | P71S | Cct | Tct | 8 | 8 | B.1.1.434 | 0.002788 |
E | 71 | P71A | CcT | GcG | 4 | 8 | B.1.1.7 | 0.000004 |
E | 71 | P71A | Cct | Gct | 4 | 8 | B.1.1.7 | 0.000004 |
E | 71 | P71L | cCt | cTt | 8 | 8 | B.1.177.21 | 0.000612 |
E | 71 | P71L | cCt | cTt | 8 | 8 | B.1.561 | 0.003176 |
E | 71 | P71del | CCT | --- | 8 | 8 | P.1 | 0.000126 |
E | 71 | P71L | cCt | cTt | 7 | 8 | P.1.1 | 0.002224 |
E | 71 | P71L | cCT | cTA | 1 | 8 | P.1.1 | 0.000318 |
E | 71 | P71S | Cct | Tct | 8 | 8 | P.1.12 | 0.003872 |
E | 71 | P71L | cCt | cTt | 8 | 8 | P.2 | 0.001493 |
E | 71 | P71S | Cct | Tct | 7 | 7 | AY.102 | 0.000186 |
E | 71 | P71S | Cct | Tct | 7 | 7 | AY.120 | 0.00026 |
E | 71 | P71H | cCt | cAt | 7 | 7 | AY.25 | 0.000042 |
E | 71 | P71R | cCt | cGt | 7 | 7 | AY.4 | 0.000011 |
E | 71 | P71L | cCt | cTt | 7 | 7 | AY.93 | 0.001912 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.1.28 | 0.002179 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.1.311 | 0.002507 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.177.15 | 0.004416 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.36.36 | 0.004214 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.396 | 0.00494 |
E | 71 | P71H | cCt | cAt | 7 | 7 | B.1.429 | 0.000165 |
E | 71 | P71T | Cct | Act | 7 | 7 | B.1.526 | 0.000165 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.602 | 0.045752 |
E | 71 | P71L | cCt | cTt | 7 | 7 | B.1.609 | 0.003356 |
E | 71 | P71L | cCt | cTt | 3 | 6 | 0.166667 | |
E | 71 | P71S | Cct | Tct | 3 | 6 | 0.166667 | |
E | 71 | P71S | CcT | TcC | 2 | 6 | 0.111111 | |
E | 71 | P71L | cCT | cTA | 1 | 6 | 0.055556 | |
E | 71 | P71L | CCT | TTA | 1 | 6 | 0.055556 | |
E | 71 | P71L | cCT | cTC | 1 | 6 | 0.055556 | |
E | 71 | P71S | CcT | TcA | 1 | 6 | 0.055556 | |
E | 71 | P71S | Cct | Tct | 6 | 6 | A.2.5 | 0.002994 |
E | 71 | P71Y | CCt | TAt | 4 | 6 | All | 0.000001 |
E | 71 | P71Y | CCT | TAC | 2 | 6 | All | 0 |
E | 71 | P71L | cCt | cTt | 6 | 6 | AY.100 | 0.000276 |
E | 71 | P71S | Cct | Tct | 6 | 6 | AY.103 | 0.000037 |
E | 71 | P71L | cCt | cTt | 6 | 6 | AY.119 | 0.000212 |
E | 71 | P71H | cCt | cAt | 6 | 6 | AY.20 | 0.000233 |
E | 71 | P71H | cCt | cAt | 6 | 6 | AY.3 | 0.00006 |
E | 71 | P71S | Cct | Tct | 6 | 6 | AY.30 | 0.002374 |
E | 71 | P71L | cCt | cTt | 6 | 6 | AY.42 | 0.000241 |
E | 71 | P71L | cCt | cTt | 6 | 6 | AY.47 | 0.000187 |
E | 71 | P71L | cCt | cTt | 5 | 6 | AY.61 | 0.000524 |
E | 71 | P71L | cCT | cTA | 1 | 6 | AY.61 | 0.000105 |
E | 71 | P71S | Cct | Tct | 6 | 6 | B.1.177.81 | 0.001136 |
E | 71 | P71L | cCt | cTt | 6 | 6 | B.1.177.82 | 0.002864 |
E | 71 | P71L | cCt | cTt | 6 | 6 | B.1.234 | 0.000792 |
E | 71 | P71S | Cct | Tct | 6 | 6 | B.1.285 | 0.545455 |
E | 71 | P71L | cCt | cTt | 6 | 6 | C.30 | 0.010363 |
E | 71 | P71L | cCt | cTt | 5 | 5 | A | 0.001935 |
E | 71 | P71L | cCt | cTt | 5 | 5 | A.1 | 0.001409 |
E | 71 | P71S | Cct | Tct | 5 | 5 | AY.100 | 0.00023 |
E | 71 | P71L | cCt | cTt | 5 | 5 | AY.102 | 0.000133 |
E | 71 | P71H | cCt | cAt | 5 | 5 | AY.3.1 | 0.000426 |
E | 71 | P71S | Cct | Tct | 5 | 5 | AY.34 | 0.000485 |
E | 71 | P71L | cCt | cTt | 5 | 5 | AY.45 | 0.000608 |
E | 71 | P71L | cCt | cTt | 5 | 5 | AY.46.6 | 0.000361 |
E | 71 | P71S | Cct | Tct | 5 | 5 | AY.54 | 0.000477 |
E | 71 | P71L | cCt | cTt | 5 | 5 | AY.98 | 0.000395 |
E | 71 | P71L | cCt | cTt | 5 | 5 | B.1.1.1 | 0.001633 |
E | 71 | P71L | cCt | cTt | 5 | 5 | B.1.1.284 | 0.000537 |
E | 71 | P71L | cCt | cTt | 5 | 5 | B.1.1.416 | 0.004525 |
E | 71 | P71S | Cct | Tct | 5 | 5 | B.1.1.63 | 0.001929 |
E | 71 | P71del | CCT | --- | 5 | 5 | B.1.1.7 | 0.000004 |
E | 71 | P71S | Cct | Tct | 5 | 5 | B.1.160 | 0.000156 |
E | 71 | P71P | ccT | ccC | 4 | 5 | B.1.177 | 0.000053 |
E | 71 | P71P | ccT | ccG | 1 | 5 | B.1.177 | 0.000013 |
E | 71 | P71T | Cct | Act | 5 | 5 | B.1.2 | 0.000044 |
E | 71 | P71L | cCt | cTt | 5 | 5 | B.1.35 | 0.042373 |
E | 71 | P71L | cCt | cTt | 5 | 5 | B.1.36.29 | 0.002587 |
E | 71 | P71L | cCt | cTt | 5 | 5 | B.1.367 | 0.003962 |
E | 71 | P71A | CcT | GcG | 5 | 5 | B.1.525 | 0.000566 |
E | 71 | P71T | Cct | Act | 3 | 5 | B.1.525 | 0.000339 |
E | 71 | P71T | CcT | AcG | 2 | 5 | B.1.525 | 0.000226 |
E | 71 | P71S | Cct | Tct | 5 | 5 | B.1.526 | 0.000118 |
E | 71 | P71S | Cct | Tct | 5 | 5 | B.1.561 | 0.001985 |
E | 71 | P71S | Cct | Tct | 5 | 5 | B.1.621 | 0.000443 |
E | 71 | P71V | CCT | GTA | 4 | 5 | P.1.1 | 0.001271 |
E | 71 | P71V | CCt | GTt | 1 | 5 | P.1.1 | 0.000318 |
E | 71 | P71L | cCt | cTt | 5 | 5 | R.1 | 0.00045 |
E | 71 | P71del | CCT | --- | 4 | 4 | 0.222222 | |
E | 71 | P71L | cCt | cTt | 4 | 4 | A.2.5 | 0.001996 |
E | 71 | P71L | cCt | cTt | 4 | 4 | AY.14 | 0.000352 |
E | 71 | P71L | cCt | cTt | 4 | 4 | AY.23 | 0.000279 |
E | 71 | P71L | cCt | cTt | 4 | 4 | AY.24 | 0.001724 |
E | 71 | P71P | ccT | ccC | 4 | 4 | AY.25 | 0.000024 |
E | 71 | P71H | cCt | cAt | 4 | 4 | AY.33 | 0.000267 |
E | 71 | P71L | cCt | cTt | 4 | 4 | AY.36 | 0.000593 |
E | 71 | P71S | Cct | Tct | 4 | 4 | AY.45 | 0.000487 |
E | 71 | P71L | cCt | cTt | 4 | 4 | AY.56 | 0.006421 |
E | 71 | P71S | Cct | Tct | 4 | 4 | AY.6 | 0.000165 |
E | 71 | P71V | CCT | GTA | 3 | 4 | AY.61 | 0.000314 |
E | 71 | P71V | CCt | GTt | 1 | 4 | AY.61 | 0.000105 |
E | 71 | P71L | cCt | cTt | 4 | 4 | AY.9 | 0.00027 |
E | 71 | P71S | Cct | Tct | 4 | 4 | AY.98 | 0.000316 |
E | 71 | P71P | ccT | ccC | 3 | 4 | B.1 | 0.000027 |
E | 71 | P71P | ccT | ccA | 1 | 4 | B.1 | 0.000009 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.1.291 | 0.00297 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.1.306 | 0.001754 |
E | 71 | P71H | cCt | cAt | 4 | 4 | B.1.165 | 0.047619 |
E | 71 | P71V | CCT | GTA | 4 | 4 | B.1.177 | 0.000053 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.177.57 | 0.001124 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.177.73 | 0.002265 |
E | 71 | P71R | cCt | cGt | 4 | 4 | B.1.177.82 | 0.001909 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.404 | 0.005208 |
E | 71 | P71S | Cct | Tct | 4 | 4 | B.1.429 | 0.000094 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.438.1 | 0.000429 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.470 | 0.005618 |
E | 71 | P71S | Cct | Tct | 4 | 4 | B.1.595 | 0.001044 |
E | 71 | P71H | cCt | cAt | 4 | 4 | B.1.596 | 0.000349 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.1.623 | 0.002146 |
E | 71 | P71L | cCt | cTt | 4 | 4 | B.6 | 0.00364 |
E | 71 | P71L | cCt | cTt | 4 | 4 | N.5 | 0.007067 |
E | 71 | P71S | Cct | Tct | 4 | 4 | P.1.1 | 0.001271 |
E | 71 | P71L | cCt | cTt | 4 | 4 | P.1.12 | 0.001936 |
E | 71 | P71del | CCT | --- | 4 | 4 | P.1.15 | 0.000929 |
E | 71 | P71L | cCt | cTt | 4 | 4 | P.1.15 | 0.000929 |
E | 71 | P71L | cCt | cTt | 4 | 4 | Q.3 | 0.00058 |
E | 71 | P71P | ccT | ccC | 2 | 3 | 0.111111 | |
E | 71 | P71P | ccT | ccA | 1 | 3 | 0.055556 | |
E | 71 | P71L | cCt | cTt | 3 | 3 | AD.2 | 0.000657 |
E | 71 | P71T | Cct | Act | 3 | 3 | AY.103 | 0.000019 |
E | 71 | P71S | Cct | Tct | 3 | 3 | AY.116 | 0.00086 |
E | 71 | P71L | cCt | cTt | 3 | 3 | AY.116.1 | 0.000934 |
E | 71 | P71L | cCt | cTt | 3 | 3 | AY.34 | 0.000291 |
E | 71 | P71H | cCt | cAt | 3 | 3 | AY.45 | 0.000365 |
E | 71 | P71S | Cct | Tct | 3 | 3 | AY.47 | 0.000093 |
E | 71 | P71S | Cct | Tct | 3 | 3 | AY.5 | 0.000062 |
E | 71 | P71L | cCt | cTt | 3 | 3 | AY.59 | 0.001589 |
E | 71 | P71H | cCt | cAt | 3 | 3 | AY.6 | 0.000123 |
E | 71 | P71S | Cct | Tct | 3 | 3 | AY.70 | 0.000626 |
E | 71 | P71T | Cct | Act | 3 | 3 | AY.84 | 0.001312 |
E | 71 | P71L | cCt | cTt | 3 | 3 | AY.9.2 | 0.00011 |
E | 71 | P71H | cCt | cAt | 3 | 3 | AY.92 | 0.000862 |
E | 71 | P71H | cCt | cAt | 3 | 3 | AY.99.2 | 0.000276 |
E | 71 | P71L | cCt | cTt | 3 | 3 | AY.99.2 | 0.000276 |
E | 71 | P71T | Cct | Act | 3 | 3 | B.1 | 0.000027 |
E | 71 | P71S | Cct | Tct | 3 | 3 | B.1.1.214 | 0.000166 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.1.409 | 0.008499 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.1.420 | 0.003018 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.1.432 | 0.003797 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.1.507 | 0.026087 |
E | 71 | P71V | CCT | GTA | 2 | 3 | B.1.1.7 | 0.000002 |
E | 71 | P71V | CCt | GTt | 1 | 3 | B.1.1.7 | 0.000001 |
E | 71 | P71R | cCt | cGt | 3 | 3 | B.1.177 | 0.00004 |
E | 71 | P71S | Cct | Tct | 3 | 3 | B.1.177.52 | 0.005272 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.177.8 | 0.002257 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.240 | 0.000647 |
E | 71 | P71V | CCT | GTA | 3 | 3 | B.1.258 | 0.0002 |
E | 71 | P71V | CCt | GTt | 3 | 3 | B.1.351 | 0.000089 |
E | 71 | P71del1 | cCT | cT- | 3 | 3 | B.1.351 | 0.000089 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.36 | 0.000438 |
E | 71 | P71S | Cct | Tct | 3 | 3 | B.1.397 | 0.014563 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.427 | 0.000151 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.549 | 0.021583 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.582 | 0.001472 |
E | 71 | P71L | cCt | cTt | 3 | 3 | B.1.619 | 0.002613 |
E | 71 | P71del | CCT | --- | 3 | 3 | B.1.621 | 0.000266 |
E | 71 | P71S | Cct | Tct | 3 | 3 | B.1.621.1 | 0.001517 |
E | 71 | P71L | cCt | cTt | 3 | 3 | C.36 | 0.002732 |
E | 71 | P71P | ccT | ccC | 3 | 3 | C.37 | 0.000348 |
E | 71 | P71del | CCT | --- | 3 | 3 | C.37 | 0.000348 |
E | 71 | P71L | cCt | cTt | 3 | 3 | D.2 | 0.000225 |
E | 71 | P71S | Cct | Tct | 3 | 3 | P.1.14 | 0.000143 |
E | 71 | P71L | cCt | cTt | 3 | 3 | P.1.7 | 0.000958 |
E | 71 | P71S | Cct | Tct | 3 | 3 | Q.8 | 0.000495 |
E | 71 | P71L | cCt | cTt | 3 | 3 | Q.8 | 0.000495 |
E | 71 | P71H | cCT | cAC | 1 | 2 | 0.055556 | |
E | 71 | P71Y | CCt | TAt | 1 | 2 | 0.055556 | |
E | 71 | P71Y | CCT | TAC | 1 | 2 | 0.055556 | |
E | 71 | P71F | CCt | TTt | 1 | 2 | 0.055556 | |
E | 71 | P71F | CCT | TTC | 1 | 2 | 0.055556 | |
E | 71 | P71H | cCt | cAt | 1 | 2 | 0.055556 | |
E | 71 | P71V | CCT | GTA | 2 | 2 | A.2.5.2 | 0.003145 |
E | 71 | P71S | Cct | Tct | 2 | 2 | A.4 | 0.025641 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AS.2 | 0.03125 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AU.3 | 0.004219 |
E | 71 | P71R | cCt | cGt | 2 | 2 | AY.103 | 0.000012 |
E | 71 | P71P | ccT | ccC | 2 | 2 | AY.103 | 0.000012 |
E | 71 | P71T | Cct | Act | 2 | 2 | AY.111 | 0.000366 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.113 | 0.000285 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.117 | 0.000169 |
E | 71 | P71H | cCt | cAt | 2 | 2 | AY.120 | 0.000074 |
E | 71 | P71H | cCt | cAt | 2 | 2 | AY.120.2 | 0.002571 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.121 | 0.000271 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.121 | 0.000271 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.16 | 0.000759 |
E | 71 | P71T | Cct | Act | 2 | 2 | AY.23 | 0.000139 |
E | 71 | P71del | CCT | --- | 2 | 2 | AY.25 | 0.000012 |
E | 71 | P71H | cCt | cAt | 2 | 2 | AY.26 | 0.000057 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.26 | 0.000057 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.28 | 0.003781 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.30 | 0.000791 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.37 | 0.000632 |
E | 71 | P71R | cCt | cGt | 2 | 2 | AY.39 | 0.000049 |
E | 71 | P71del | CCT | --- | 2 | 2 | AY.4 | 0.000003 |
E | 71 | P71R | cCt | cGt | 2 | 2 | AY.4.2 | 0.000043 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.4.5 | 0.000215 |
E | 71 | P71del | CCT | --- | 2 | 2 | AY.43 | 0.000009 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.46 | 0.000208 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.46.6 | 0.000144 |
E | 71 | P71P | ccT | ccC | 2 | 2 | AY.47 | 0.000062 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.48 | 0.00093 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.55 | 0.001835 |
E | 71 | P71A | Cct | Gct | 1 | 2 | AY.61 | 0.000105 |
E | 71 | P71A | CcT | GcA | 1 | 2 | AY.61 | 0.000105 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.67 | 0.000929 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.68 | 0.000547 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.7.1 | 0.000225 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.71 | 0.00095 |
E | 71 | P71R | cCt | cGt | 2 | 2 | AY.75.1 | 0.000361 |
E | 71 | P71S | Cct | Tct | 2 | 2 | AY.9.1 | 0.000167 |
E | 71 | P71L | cCt | cTt | 2 | 2 | AY.92 | 0.000575 |
E | 71 | P71H | cCt | cAt | 2 | 2 | B | 0.000256 |
E | 71 | P71R | cCt | cGt | 2 | 2 | B.1 | 0.000018 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.135 | 0.00939 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.210 | 0.011429 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.1.216 | 0.001781 |
E | 71 | P71P | ccT | ccA | 2 | 2 | B.1.1.265 | 0.006309 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.317 | 0.000823 |
E | 71 | P71T | Cct | Act | 2 | 2 | B.1.1.317 | 0.000823 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.318 | 0.000604 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.1.354 | 0.008772 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.372 | 0.001377 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.397 | 0.004505 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.434 | 0.000697 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.1.487 | 0.011173 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.160.15 | 0.009901 |
E | 71 | P71P | ccT | ccG | 2 | 2 | B.1.177.15 | 0.001262 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.177.31 | 0.022989 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.177.60 | 0.000437 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.177.65 | 0.001331 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.177.7 | 0.00033 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.177.81 | 0.000379 |
E | 71 | P71V | CCT | GTA | 2 | 2 | B.1.177.83 | 0.002963 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.177.86 | 0.000367 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.214.2 | 0.001199 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.214.3 | 0.014286 |
E | 71 | P71Y | CCt | TAt | 1 | 2 | B.1.221 | 0.000071 |
E | 71 | P71H | cCt | cAt | 1 | 2 | B.1.221 | 0.000071 |
E | 71 | P71Y | CCT | TAC | 1 | 2 | B.1.221 | 0.000071 |
E | 71 | P71H | cCT | cAC | 1 | 2 | B.1.221 | 0.000071 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.240 | 0.000431 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.258.17 | 0.000208 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.36.1 | 0.002281 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.36.8 | 0.002 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.375 | 0.001639 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.400 | 0.000858 |
E | 71 | P71H | cCt | cAt | 2 | 2 | B.1.427 | 0.000101 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.452 | 0.027397 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.469 | 0.00722 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.470 | 0.002809 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.499 | 0.002101 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.499 | 0.002101 |
E | 71 | P71R | cCt | cGt | 2 | 2 | B.1.517 | 0.000854 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.525 | 0.000226 |
E | 71 | P71V | CCT | GTA | 1 | 2 | B.1.525 | 0.000113 |
E | 71 | P71V | CCt | GTt | 1 | 2 | B.1.525 | 0.000113 |
E | 71 | P71R | cCt | cGt | 2 | 2 | B.1.526 | 0.000047 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.1.619.1 | 0.001283 |
E | 71 | P71V | CCT | GTA | 1 | 2 | B.1.621 | 0.000089 |
E | 71 | P71V | CCt | GTt | 1 | 2 | B.1.621 | 0.000089 |
E | 71 | P71A | Cct | Gct | 1 | 2 | B.1.621 | 0.000089 |
E | 71 | P71A | CcT | GcA | 1 | 2 | B.1.621 | 0.000089 |
E | 71 | P71A | CcT | GcA | 1 | 2 | B.1.627 | 0.00202 |
E | 71 | P71L | cCt | cTt | 1 | 2 | B.1.627 | 0.00202 |
E | 71 | P71L | cCT | cTA | 1 | 2 | B.1.627 | 0.00202 |
E | 71 | P71V | CCT | GTA | 1 | 2 | B.1.627 | 0.00202 |
E | 71 | P71A | Cct | Gct | 1 | 2 | B.1.627 | 0.00202 |
E | 71 | P71V | CCt | GTt | 1 | 2 | B.1.627 | 0.00202 |
E | 71 | P71S | Cct | Tct | 2 | 2 | B.1.78 | 0.017094 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.3 | 0.001661 |
E | 71 | P71L | cCt | cTt | 2 | 2 | B.40 | 0.000729 |
E | 71 | P71L | cCt | cTt | 2 | 2 | C.16 | 0.002121 |
E | 71 | P71F | CCT | TTC | 2 | 2 | C.36.3 | 0.001134 |
E | 71 | P71L | cCt | cTt | 2 | 2 | C.36.3 | 0.001134 |
E | 71 | P71H | cCt | cAt | 2 | 2 | C.37 | 0.000232 |
E | 71 | P71L | cCt | cTt | 2 | 2 | C.8 | 0.008929 |
E | 71 | P71S | Cct | Tct | 2 | 2 | N.9 | 0.011905 |
E | 71 | P71R | cCt | cGt | 2 | 2 | P.1 | 0.000032 |
E | 71 | P71P | ccT | ccC | 2 | 2 | P.1 | 0.000032 |
E | 71 | P71A | CcT | GcA | 1 | 2 | P.1.1 | 0.000318 |
E | 71 | P71A | Cct | Gct | 1 | 2 | P.1.1 | 0.000318 |
E | 71 | P71L | cCt | cTt | 2 | 2 | P.1.16 | 0.000748 |
E | 71 | P71H | cCt | cAt | 2 | 2 | P.1.17 | 0.000324 |
E | 71 | P71L | cCt | cTt | 2 | 2 | P.1.8 | 0.009569 |
E | 71 | P71H | cCt | cAt | 2 | 2 | Q.8 | 0.00033 |
E | 71 | P71T | Cct | Act | 1 | 1 | A | 0.000387 |
E | 71 | P71S | Cct | Tct | 1 | 1 | A.1 | 0.000282 |
E | 71 | P71S | Cct | Tct | 1 | 1 | A.17 | 0.090909 |
E | 71 | P71L | cCt | cTt | 1 | 1 | A.2 | 0.000662 |
E | 71 | P71T | Cct | Act | 1 | 1 | A.2.4 | 0.003367 |
E | 71 | P71L | cCt | cTt | 1 | 1 | A.23.1 | 0.000704 |
E | 71 | P71L | cCt | cTt | 1 | 1 | A.27 | 0.001656 |
E | 71 | P71L | cCt | cTt | 1 | 1 | A.5 | 0.001923 |
E | 71 | P71S | Cct | Tct | 1 | 1 | A.9 | 0.045455 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AA.1 | 0.007246 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AU.2 | 0.002421 |
E | 71 | P71P | ccT | ccG | 1 | 1 | AY.1 | 0.000396 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.1 | 0.000396 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.100 | 0.000046 |
E | 71 | P71P | ccT | ccA | 1 | 1 | AY.100 | 0.000046 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.102 | 0.000027 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.106 | 0.000335 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.107 | 0.000466 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.108 | 0.001103 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.110 | 0.000113 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.111 | 0.000183 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.113 | 0.000142 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.113 | 0.000142 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.115 | 0.005208 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.116.1 | 0.000311 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.117 | 0.000085 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.118 | 0.000063 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.118 | 0.000063 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.118 | 0.000063 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.119 | 0.000035 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.12 | 0.000316 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.120 | 0.000037 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.120.1 | 0.000321 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.13 | 0.000161 |
E | 71 | P71P | ccT | ccC | 1 | 1 | AY.20 | 0.000039 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.20 | 0.000039 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.22 | 0.002092 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.23 | 0.00007 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.23 | 0.00007 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.26 | 0.000028 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.27 | 0.000065 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.29 | 0.000016 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.29.1 | 0.000221 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.29.1 | 0.000221 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.3 | 0.00001 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.3.1 | 0.000085 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.32 | 0.000532 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.33 | 0.000067 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.34.1 | 0.00051 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.38 | 0.000499 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.38 | 0.000499 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.39 | 0.000025 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.39 | 0.000025 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.39 | 0.000025 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.39.1 | 0.00004 |
E | 71 | P71V | CCT | GTA | 1 | 1 | AY.39.1 | 0.00004 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.4.2.1 | 0.000149 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.4.4 | 0.000409 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.4.5 | 0.000107 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.4.5 | 0.000107 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.41 | 0.000294 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.42 | 0.00004 |
E | 71 | P71T | Cct | Act | 1 | 1 | AY.43 | 0.000004 |
E | 71 | P71del1 | Cct | -ct | 1 | 1 | AY.43 | 0.000004 |
E | 71 | P71Y | CCt | TAt | 1 | 1 | AY.44 | 0.000006 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.46 | 0.000104 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.46.2 | 0.000635 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.46.2 | 0.000635 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.46.3 | 0.000934 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.46.5 | 0.000198 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.46.6 | 0.000072 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.5.3 | 0.000337 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.5.4 | 0.000277 |
E | 71 | P71P | ccT | ccA | 1 | 1 | AY.5.4 | 0.000277 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.51 | 0.000909 |
E | 71 | P71T | Cct | Act | 1 | 1 | AY.52 | 0.000814 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.52 | 0.000814 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.53 | 0.000288 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.54 | 0.000095 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.54 | 0.000095 |
E | 71 | P71P | ccT | ccA | 1 | 1 | AY.55 | 0.000917 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.55 | 0.000917 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.55 | 0.000917 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.59 | 0.00053 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.6 | 0.000041 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.61 | 0.000105 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.61 | 0.000105 |
E | 71 | P71P | ccT | ccA | 1 | 1 | AY.61 | 0.000105 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.62 | 0.000436 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.63 | 0.000387 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.65 | 0.000533 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.68 | 0.000274 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.68 | 0.000274 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.7 | 0.000196 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.7.1 | 0.000113 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.7.1 | 0.000113 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.7.2 | 0.000559 |
E | 71 | P71T | Cct | Act | 1 | 1 | AY.70 | 0.000209 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.73 | 0.000665 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.74 | 0.000116 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.74 | 0.000116 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.75 | 0.000056 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.75.1 | 0.00018 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.84 | 0.000437 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.85 | 0.000427 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.9 | 0.000068 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.9.1 | 0.000084 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.90 | 0.000684 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.92 | 0.000287 |
E | 71 | P71del | CCT | --- | 1 | 1 | AY.95 | 0.000761 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AY.96 | 0.002075 |
E | 71 | P71H | cCt | cAt | 1 | 1 | AY.98 | 0.000079 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.98 | 0.000079 |
E | 71 | P71R | cCt | cGt | 1 | 1 | AY.99.2 | 0.000092 |
E | 71 | P71S | Cct | Tct | 1 | 1 | AY.99.2 | 0.000092 |
E | 71 | P71L | cCt | cTt | 1 | 1 | AZ.1 | 0.000867 |
E | 71 | P71del | CCT | --- | 1 | 1 | B | 0.000128 |
E | 71 | P71del1 | Cct | -ct | 1 | 1 | B.1 | 0.000009 |
E | 71 | P71A | Cct | Gct | 1 | 1 | B.1.1 | 0.000018 |
E | 71 | P71F | CCt | TTt | 1 | 1 | B.1.1 | 0.000018 |
E | 71 | P71R | cCt | cGt | 1 | 1 | B.1.1 | 0.000018 |
E | 71 | P71P | ccT | ccC | 1 | 1 | B.1.1 | 0.000018 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.1 | 0.000018 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.134 | 0.011364 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.141 | 0.002012 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.148 | 0.008772 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.157 | 0.000913 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.1.170 | 0.001247 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.189 | 0.001513 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.192 | 0.002309 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.198 | 0.001468 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.207 | 0.001182 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.216 | 0.00089 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.222 | 0.000204 |
E | 71 | P71P | ccT | ccC | 1 | 1 | B.1.1.222 | 0.000204 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.226 | 0.005814 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.234 | 0.012048 |
E | 71 | P71V | CCT | GTA | 1 | 1 | B.1.1.241 | 0.00207 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.253 | 0.002506 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.255 | 0.00303 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.257 | 0.009709 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.28 | 0.000311 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.291 | 0.000742 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.294 | 0.001266 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.308 | 0.011765 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.315 | 0.008475 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.317 | 0.000412 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.33 | 0.000421 |
E | 71 | P71R | cCt | cGt | 1 | 1 | B.1.1.33 | 0.000421 |
E | 71 | P71R | cCt | cGt | 1 | 1 | B.1.1.349 | 0.010309 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.354 | 0.004386 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.369 | 0.000446 |
E | 71 | P71P | ccT | ccC | 1 | 1 | B.1.1.369 | 0.000446 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.370 | 0.012658 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.375 | 0.011905 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.389 | 0.006061 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.1.448 | 0.002033 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.462 | 0.008621 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.464 | 0.001473 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.485 | 0.016667 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.1.519 | 0.00004 |
E | 71 | P71del1 | Cct | -ct | 1 | 1 | B.1.1.7 | 0.000001 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.1.71 | 0.006061 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.1.77 | 0.041667 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.110 | 0.004525 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.110.3 | 0.000718 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.126 | 0.001276 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.128 | 0.000635 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.147 | 0.000756 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.157 | 0.002985 |
E | 71 | P71T | Cct | Act | 1 | 1 | B.1.160 | 0.000031 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.160.14 | 0.002119 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.160.32 | 0.004292 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.177 | 0.000013 |
E | 71 | P71del1 | ccT | cc- | 1 | 1 | B.1.177 | 0.000013 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.30 | 0.002513 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.4 | 0.000211 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.40 | 0.005155 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.45 | 0.000381 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.177.46 | 0.000918 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.6 | 0.000977 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.177.65 | 0.000665 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.70 | 0.005917 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.72 | 0.00339 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.177.82 | 0.000477 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.177.86 | 0.000183 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.177.87 | 0.000728 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.205 | 0.02381 |
E | 71 | P71del | CCT | --- | 1 | 1 | B.1.218 | 0.005155 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.218 | 0.005155 |
E | 71 | P71P | ccT | ccC | 1 | 1 | B.1.221 | 0.000071 |
E | 71 | P71F | CCT | TTC | 1 | 1 | B.1.221 | 0.000071 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.232 | 0.000537 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.232 | 0.000537 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.234 | 0.000132 |
E | 71 | P71P | ccT | ccC | 1 | 1 | B.1.234 | 0.000132 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.236 | 0.002053 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.237 | 0.004975 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.237 | 0.004975 |
E | 71 | P71Y | CCt | TAt | 1 | 1 | B.1.243 | 0.00007 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.258 | 0.000067 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.258.11 | 0.000396 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.258.22 | 0.002667 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.258.3 | 0.001675 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.258.9 | 0.005 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.260 | 0.003344 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.289 | 0.00266 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.3 | 0.002618 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.311 | 0.000275 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.320 | 0.001245 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.335 | 0.010309 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.340 | 0.004292 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.344 | 0.008197 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.350 | 0.002933 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.351 | 0.00003 |
E | 71 | P71P | ccT | ccC | 1 | 1 | B.1.356 | 0.001727 |
E | 71 | P71del | CCT | --- | 1 | 1 | B.1.36 | 0.000146 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.36.10 | 0.004785 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.36.18 | 0.00042 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.36.18 | 0.00042 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.36.19 | 0.009259 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.36.2 | 0.010753 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.36.27 | 0.000763 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.36.31 | 0.001751 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.36.39 | 0.002217 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.361 | 0.001289 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.362 | 0.001541 |
E | 71 | P71V | CCT | GTA | 1 | 1 | B.1.367 | 0.000792 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.369 | 0.000285 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.381 | 0.007812 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.390 | 0.010638 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.391 | 0.001127 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.401 | 0.008197 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.420 | 0.010417 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.421 | 0.007463 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.426 | 0.001009 |
E | 71 | P71R | cCt | cGt | 1 | 1 | B.1.428 | 0.00102 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.459 | 0.004082 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.459 | 0.004082 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.466.2 | 0.000391 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.480 | 0.002488 |
E | 71 | P71R | cCt | cGt | 1 | 1 | B.1.525 | 0.000113 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.525 | 0.000113 |
E | 71 | P71del | CCT | --- | 1 | 1 | B.1.526 | 0.000024 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.526 | 0.000024 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.538 | 0.008065 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.564 | 0.000426 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.568 | 0.001111 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.571 | 0.009709 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.575 | 0.000303 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.580 | 0.004065 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.580 | 0.004065 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.582 | 0.000491 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.587 | 0.001898 |
E | 71 | P71F | CCt | TTt | 1 | 1 | B.1.596 | 0.000087 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.612 | 0.002653 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.615 | 0.04 |
E | 71 | P71del | CCT | --- | 1 | 1 | B.1.617.1 | 0.000129 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.1.617.1 | 0.000129 |
E | 71 | P71F | CCt | TTt | 1 | 1 | B.1.617.2 | 0.000004 |
E | 71 | P71del1 | Cct | -ct | 1 | 1 | B.1.617.3 | 0.002985 |
E | 71 | P71P | ccT | ccA | 1 | 1 | B.1.621 | 0.000089 |
E | 71 | P71R | cCt | cGt | 1 | 1 | B.1.621.1 | 0.000506 |
E | 71 | P71T | Cct | Act | 1 | 1 | B.1.623 | 0.000536 |
E | 71 | P71del | CCT | --- | 1 | 1 | B.1.627 | 0.00202 |
E | 71 | P71P | ccT | ccA | 1 | 1 | B.1.627 | 0.00202 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.628 | 0.000352 |
E | 71 | P71A | Cct | Gct | 1 | 1 | B.1.637 | 0.000073 |
E | 71 | P71H | cCt | cAt | 1 | 1 | B.1.637 | 0.000073 |
E | 71 | P71del | CCT | --- | 1 | 1 | B.1.638 | 0.052632 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.1.78 | 0.008547 |
E | 71 | P71L | cCt | cTt | 1 | 1 | B.39 | 0.002331 |
E | 71 | P71S | Cct | Tct | 1 | 1 | B.55 | 0.00295 |
E | 71 | P71L | cCt | cTt | 1 | 1 | C.1 | 0.002392 |
E | 71 | P71S | Cct | Tct | 1 | 1 | C.37 | 0.000116 |
E | 71 | P71del | CCT | --- | 1 | 1 | C.37.1 | 0.002618 |
E | 71 | P71H | cCt | cAt | 1 | 1 | P.1 | 0.000016 |
E | 71 | P71P | ccT | ccA | 1 | 1 | P.1.1 | 0.000318 |
E | 71 | P71S | Cct | Tct | 1 | 1 | P.1.13 | 0.000898 |
E | 71 | P71del | CCT | --- | 1 | 1 | P.1.13 | 0.000898 |
E | 71 | P71S | Cct | Tct | 1 | 1 | P.1.15 | 0.000232 |
E | 71 | P71del1 | CcT | -cN | 1 | 1 | P.1.15 | 0.000232 |
E | 71 | P71S | Cct | Tct | 1 | 1 | P.1.17 | 0.000162 |
E | 71 | P71L | cCt | cTt | 1 | 1 | P.1.2 | 0.001156 |
E | 71 | P71del | CCT | --- | 1 | 1 | P.1.7 | 0.000319 |
E | 71 | P71P | ccT | ccA | 1 | 1 | P.2 | 0.000187 |
E | 71 | P71L | cCt | cTt | 1 | 1 | P.3 | 0.001595 |
E | 71 | P71L | cCt | cTt | 1 | 1 | Q.1 | 0.000126 |
E | 71 | P71S | Cct | Tct | 1 | 1 | Q.3 | 0.000145 |
E | 71 | P71L | cCt | cTt | 1 | 1 | Q.4 | 0.000455 |
E | 71 | P71T | Cct | Act | 1 | 1 | Q.8 | 0.000165 |
E | 71 | P71S | Cct | Tct | 1 | 1 | R.1 | 0.00009 |
E | 71 | P71L | cCt | cTt | 1 | 1 | W.4 | 0.001351 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|