CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = E : CodonNum = 65 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
E65L65LsynctGctT322525920.80372126437-26439

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
E65L65LctGctT25923225All0.000496
E65L65LctGctT344404AY.40.000535
E65L65LctGctT135392B.1.1.70.000121
E65L65LctGctT312313AY.30.003103
E65L65LctGctT296310B.1.617.20.001115
E65L65LctGctT285285AY.940.126162
E65L65LctGctT189201AY.440.00115
E65L65LctGctT128133AY.430.000567
E65L65LctGctT7692AY.1030.000472
E65L65LctGctT3881B.10.000348
E65L65LctGctT4054B.1.1770.000527
E65L65LctGctT3842AY.390.000939
E65L65LctGctT2739AY.250.000162
E65L65LctGctT3939C.36.30.022121
E65L65LctGctT3636AY.1010.017656
E65L65LctGctT3136AY.540.002956
E65L65LctGctT1831B.1.20.000158
E65L65LctGctT3031B.1.3510.000892
E65L65LctGctT1429AY.1200.000521
E65L65LctGctT2429B.1.5260.000564
E65L65LctGctT2125AY.1020.000557
E65L65LctGctT2323B.1.2400.004958
E65L65LctGctT1521B.1.1.5190.000596
E65L65LctGctT1219P.10.000189
E65L65LctGctT1517AY.1180.00094
E65L65LctGctT1517AY.330.001002
E65L65LctGctT1717AY.4.20.000369
E65L65LctGctT1117AY.50.000227
E65L65LctGctT1316AY.260.000368
E65L65LctGctT1316AY.420.000523
E65L65LctGctT1416B.1.10.000254
E65L65LctGctT1114AY.290.000174
E65L65LctGctT1313B.1.1.3690.005801
E65L65LctGctT1111B.1.1.370.002122
E65L65LctGctT1010B.1.1.280.003112
E65L65LctGctT810B.1.5960.000697
E65L65LctGctT99AY.1190.000318
E65L65LctGctT88B.1.177.70.001319
E65L65LctGctT68P.1.70.001916
E65L65LctGctT470.222222
E65L65LctGctT67AY.460.000624
E65L65LctGctT77AY.46.60.000505
E65L65LctGctT77B.1.617.10.000903
E65L65LctGctT47C.370.000464
E65L65LctGctT67P.1.140.000287
E65L65LctGctT66AY.5.40.00166
E65L65LctGctT66AY.780.009245
E65L65LctGctT66AY.98.10.000291
E65L65LctGctT45AY.1210.000541
E65L65LctGctT35AY.200.000117
E65L65LctGctT45AY.230.000279
E65L65LctGctT45B.1.1.700.001364
E65L65LctGctT55B.1.4800.012438
E65L65LctGctT34AY.3.10.000256
E65L65LctGctT44AY.450.000487
E65L65LctGctT34AY.470.000093
E65L65LctGctT44AY.60.000165
E65L65LctGctT44AY.610.000419
E65L65LctGctT44AY.750.000224
E65L65LctGctT44AY.9.20.000147
E65L65LctGctT14B.1.6210.000089
E65L65LctGctT14Q.30.000145
E65L65LctGctT34R.10.00027
E65L65LctGctT33AM.40.010714
E65L65LctGctT33AY.1060.001005
E65L65LctGctT13AY.1090.00074
E65L65LctGctT33AY.16.10.00141
E65L65LctGctT33AY.340.000291
E65L65LctGctT23AY.34.10.00102
E65L65LctGctT23AY.39.10.000079
E65L65LctGctT33AY.90.000203
E65L65LctGctT33B.1.1.3060.001315
E65L65LctGctT33B.1.110.30.002155
E65L65LctGctT13B.1.6090.000479
E65L65LctGctT33B.1.6370.000219
E65L65LctGctT33C.390.056604
E65L65LctGctT13D.20.000075
E65L65LctGctT33Q.20.00184
E65L65LctGctT12A.20.000662
E65L65LctGctT12AY.1000.000046
E65L65LctGctT22AY.1050.001286
E65L65LctGctT22AY.116.10.000623
E65L65LctGctT22AY.120.000632
E65L65LctGctT22AY.4.40.000818
E65L65LctGctT12AY.46.40.000165
E65L65LctGctT22AY.670.000929
E65L65LctGctT22AY.680.000547
E65L65LctGctT22AY.840.000875
E65L65LctGctT22AY.920.000575
E65L65LctGctT22AY.99.20.000184
E65L65LctGctT22B0.000256
E65L65LctGctT22B.1.1.2140.000111
E65L65LctGctT22B.1.1.2290.011494
E65L65LctGctT22B.1.1.4030.051282
E65L65LctGctT22B.1.177.790.004684
E65L65LctGctT22B.1.351.20.000605
E65L65LctGctT22B.1.4560.006536
E65L65LctGctT12B.1.5950.000261
E65L65LctGctT12P.20.000187
E65L65LctGctT11A0.000387
E65L65LctGctT11AD.20.000219
E65L65LctGctT11AY.1160.000287
E65L65LctGctT11AY.120.10.000321
E65L65LctGctT11AY.120.2.10.000498
E65L65LctGctT11AY.130.000161
E65L65LctGctT11AY.170.008197
E65L65LctGctT11AY.320.000532
E65L65LctGctT11AY.350.000233
E65L65LctGctT11AY.360.000148
E65L65LctGctT11AY.370.000316
E65L65LctGctT11AY.4.50.000107
E65L65LctGctT11AY.410.000294
E65L65LctGctT11AY.46.20.000635
E65L65LctGctT11AY.46.30.000934
E65L65LctGctT11AY.520.000814
E65L65LctGctT11AY.560.001605
E65L65LctGctT11AY.570.000656
E65L65LctGctT11AY.580.000907
E65L65LctGctT11AY.7.10.000113
E65L65LctGctT11AY.730.000665
E65L65LctGctT11AY.820.001357
E65L65LctGctT11AY.860.00083
E65L65LctGctT11AY.870.000833
E65L65LctGctT11AY.880.000884
E65L65LctGctT11AY.900.000684
E65L65LctGctT11AY.980.000079
E65L65LctGctT11B.1.1.1010.01
E65L65LctGctT11B.1.1.1610.003534
E65L65LctGctT11B.1.1.1760.000439
E65L65LctGctT11B.1.1.2160.00089
E65L65LctGctT11B.1.1.2800.003086
E65L65LctGctT11B.1.1.2840.000107
E65L65LctGctT11B.1.1.330.000421
E65L65LctGctT11B.1.1.3480.000796
E65L65LctGctT11B.1.1.3670.055556
E65L65LctGctT11B.1.1.3700.012658
E65L65LctGctT11B.1.1.3890.006061
E65L65LctGctT11B.1.1.40.002976
E65L65LctGctT11B.1.1030.019231
E65L65LctGctT11B.1.1470.000756
E65L65LctGctT11B.1.177.320.00135
E65L65LctGctT11B.1.177.540.000606
E65L65LctGctT11B.1.177.850.005435
E65L65LctGctT11B.1.214.20.0006
E65L65LctGctT11B.1.220.001318
E65L65LctGctT11B.1.2210.000071
E65L65LctGctT11B.1.2320.000537
E65L65LctGctT11B.1.2650.001271
E65L65LctGctT11B.1.3010.005917
E65L65LctGctT11B.1.3110.000275
E65L65LctGctT11B.1.3250.006897
E65L65LctGctT11B.1.3480.018182
E65L65LctGctT11B.1.3620.001541
E65L65LctGctT11B.1.3690.000285
E65L65LctGctT11B.1.4000.000429
E65L65LctGctT11B.1.4280.00102
E65L65LctGctT11B.1.4700.001404
E65L65LctGctT11B.1.4920.007042
E65L65LctGctT11B.1.5200.021739
E65L65LctGctT11B.1.5210.004975
E65L65LctGctT11B.1.5250.000113
E65L65LctGctT11B.1.6230.000536
E65L65LctGctT11B.550.00295
E65L65LctGctT11C.1.20.004255
E65L65LctGctT11C.260.007353
E65L65LctGctT11C.37.10.002618
E65L65LctGctT11N.50.001767
E65L65LctGctT11P.1.130.000898
E65L65LctGctT11P.1.170.000162