CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
E | 27 | L27L | syn | ttG | ttA | 1774 | 1679 | 0.946449 | 26323-26325 | |
E | 27 | L27L | syn | Ttg | Ctg | 1774 | 93 | 0.0524239 | 26323-26325 | |
E | 27 | L27L | syn | TtG | CtC | 1774 | 1 | 0.000563698 | 26323-26325 | |
E | 27 | L27L | syn | TtG | CtA | 1774 | 1 | 0.000563698 | 26323-26325 | |
E | 27 | L27F | nonsyn | ttG | ttT | 128 | 118 | 0.921875 | 26323-26325 | |
E | 27 | L27F | nonsyn | ttG | ttC | 128 | 10 | 0.078125 | 26323-26325 | |
E | 27 | L27del | del | TTG | --- | 94 | 94 | 1 | 26323-26325 | |
E | 27 | L27S | nonsyn | tTg | tCg | 47 | 45 | 0.957447 | 26323-26325 | |
E | 27 | L27S | nonsyn | tTG | tCA | 47 | 2 | 0.0425532 | 26323-26325 | |
E | 27 | L27V | nonsyn | Ttg | Gtg | 8 | 8 | 1 | 26323-26325 | |
E | 27 | L27R | nonsyn | TTG | CGT | 6 | 3 | 0.5 | 26323-26325 | |
E | 27 | L27del1 | del | Ttg | -tg | 6 | 3 | 0.5 | 26323-26325 | |
E | 27 | L27del1 | del | ttG | tt- | 6 | 2 | 0.333333 | 26323-26325 | |
E | 27 | L27R | nonsyn | TTg | CGg | 6 | 1 | 0.166667 | 26323-26325 | |
E | 27 | L27R | nonsyn | TTg | AGg | 6 | 1 | 0.166667 | 26323-26325 | |
E | 27 | L27del1 | del | TTG | -NN | 6 | 1 | 0.166667 | 26323-26325 | |
E | 27 | L27R | nonsyn | TTG | CGC | 6 | 1 | 0.166667 | 26323-26325 | |
E | 27 | L27T | nonsyn | TTG | ACC | 3 | 3 | 1 | 26323-26325 | |
E | 27 | L27X | nonsyn | tTg | tAg | 3 | 3 | 1 | 26323-26325 | |
E | 27 | L27M | nonsyn | Ttg | Atg | 3 | 3 | 1 | 26323-26325 | |
E | 27 | L27P | nonsyn | TTg | CCg | 2 | 1 | 0.5 | 26323-26325 | |
E | 27 | L27P | nonsyn | TTG | CCA | 2 | 1 | 0.5 | 26323-26325 | |
E | 27 | L27G | nonsyn | TTG | GGA | 2 | 1 | 0.5 | 26323-26325 | |
E | 27 | L27G | nonsyn | TTG | GGT | 2 | 1 | 0.5 | 26323-26325 | |
E | 27 | L27Q | nonsyn | TTG | CAA | 1 | 1 | 1 | 26323-26325 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
E | 27 | L27L | ttG | ttA | 1679 | 1774 | All | 0.000321 |
E | 27 | L27L | Ttg | Ctg | 93 | 1774 | All | 0.000018 |
E | 27 | L27L | TtG | CtA | 1 | 1774 | All | 0 |
E | 27 | L27L | TtG | CtC | 1 | 1774 | All | 0 |
E | 27 | L27L | ttG | ttA | 1494 | 1494 | B.1.232 | 0.802794 |
E | 27 | L27F | ttG | ttT | 118 | 128 | All | 0.000023 |
E | 27 | L27F | ttG | ttC | 10 | 128 | All | 0.000002 |
E | 27 | L27del | TTG | --- | 94 | 94 | All | 0.000018 |
E | 27 | L27S | tTg | tCg | 45 | 47 | All | 0.000009 |
E | 27 | L27S | tTG | tCA | 2 | 47 | All | 0 |
E | 27 | L27L | ttG | ttA | 39 | 42 | B.1 | 0.000357 |
E | 27 | L27L | Ttg | Ctg | 3 | 42 | B.1 | 0.000027 |
E | 27 | L27F | ttG | ttT | 31 | 31 | B.1.1.7 | 0.000028 |
E | 27 | L27L | Ttg | Ctg | 30 | 30 | B.1.177 | 0.000395 |
E | 27 | L27L | ttG | ttA | 29 | 29 | AY.119 | 0.001024 |
E | 27 | L27L | ttG | ttA | 26 | 29 | B.1.1.7 | 0.000023 |
E | 27 | L27L | Ttg | Ctg | 3 | 29 | B.1.1.7 | 0.000003 |
E | 27 | L27L | Ttg | Ctg | 20 | 20 | AY.4.2.1 | 0.00298 |
E | 27 | L27F | ttG | ttT | 15 | 15 | AY.25 | 0.00009 |
E | 27 | L27L | ttG | ttA | 14 | 14 | AY.44 | 0.000085 |
E | 27 | L27del | TTG | --- | 14 | 14 | P.1 | 0.000221 |
E | 27 | L27L | ttG | ttA | 7 | 13 | AY.4 | 0.000011 |
E | 27 | L27L | Ttg | Ctg | 6 | 13 | AY.4 | 0.000009 |
E | 27 | L27S | tTg | tCg | 13 | 13 | B.1.1.7 | 0.000012 |
E | 27 | L27del | TTG | --- | 9 | 9 | P.1.15 | 0.002091 |
E | 27 | L27V | Ttg | Gtg | 8 | 8 | All | 0.000002 |
E | 27 | L27L | ttG | ttA | 8 | 8 | AY.116.1 | 0.002491 |
E | 27 | L27F | ttG | ttT | 5 | 8 | AY.4 | 0.000008 |
E | 27 | L27F | ttG | ttC | 3 | 8 | AY.4 | 0.000005 |
E | 27 | L27del | TTG | --- | 8 | 8 | B.1.1.7 | 0.000007 |
E | 27 | L27L | ttG | ttA | 7 | 8 | B.1.617.2 | 0.000026 |
E | 27 | L27L | Ttg | Ctg | 1 | 8 | B.1.617.2 | 0.000004 |
E | 27 | L27del | TTG | --- | 8 | 8 | B.1.621 | 0.000708 |
E | 27 | L27del | TTG | --- | 7 | 7 | B.1 | 0.000064 |
E | 27 | L27L | Ttg | Ctg | 7 | 7 | B.1.36.18 | 0.002941 |
E | 27 | L27del1 | Ttg | -tg | 3 | 6 | All | 0.000001 |
E | 27 | L27R | TTG | CGT | 3 | 6 | All | 0.000001 |
E | 27 | L27del1 | ttG | tt- | 2 | 6 | All | 0 |
E | 27 | L27R | TTg | CGg | 1 | 6 | All | 0 |
E | 27 | L27del1 | TTG | -NN | 1 | 6 | All | 0 |
E | 27 | L27R | TTg | AGg | 1 | 6 | All | 0 |
E | 27 | L27R | TTG | CGC | 1 | 6 | All | 0 |
E | 27 | L27F | ttG | ttT | 6 | 6 | AY.3 | 0.00006 |
E | 27 | L27F | ttG | ttT | 6 | 6 | AY.44 | 0.000037 |
E | 27 | L27L | Ttg | Ctg | 6 | 6 | B.1.2 | 0.000053 |
E | 27 | L27del | TTG | --- | 6 | 6 | C.37 | 0.000696 |
E | 27 | L27L | ttG | ttA | 3 | 5 | AY.43 | 0.000013 |
E | 27 | L27L | Ttg | Ctg | 2 | 5 | AY.43 | 0.000009 |
E | 27 | L27F | ttG | ttT | 5 | 5 | B.1.1.284 | 0.000537 |
E | 27 | L27F | ttG | ttT | 5 | 5 | B.1.2 | 0.000044 |
E | 27 | L27L | ttG | ttA | 4 | 4 | AY.111 | 0.000733 |
E | 27 | L27L | ttG | ttA | 4 | 4 | AY.25 | 0.000024 |
E | 27 | L27L | ttG | ttA | 4 | 4 | AY.47 | 0.000124 |
E | 27 | L27del | TTG | --- | 4 | 4 | AY.85 | 0.001709 |
E | 27 | L27F | ttG | ttT | 3 | 4 | B.1 | 0.000027 |
E | 27 | L27F | ttG | ttC | 1 | 4 | B.1 | 0.000009 |
E | 27 | L27S | tTg | tCg | 4 | 4 | B.1.1 | 0.000073 |
E | 27 | L27L | ttG | ttA | 4 | 4 | B.1.177.21 | 0.000306 |
E | 27 | L27F | ttG | ttT | 4 | 4 | B.1.177.46 | 0.003673 |
E | 27 | L27L | Ttg | Ctg | 1 | 3 | 0.055556 | |
E | 27 | L27L | ttG | ttA | 1 | 3 | 0.055556 | |
E | 27 | L27L | TtG | CtA | 1 | 3 | 0.055556 | |
E | 27 | L27M | Ttg | Atg | 3 | 3 | All | 0.000001 |
E | 27 | L27T | TTG | ACC | 3 | 3 | All | 0.000001 |
E | 27 | L27X | tTg | tAg | 3 | 3 | All | 0.000001 |
E | 27 | L27L | ttG | ttA | 3 | 3 | AY.103 | 0.000019 |
E | 27 | L27F | ttG | ttT | 3 | 3 | AY.113 | 0.000427 |
E | 27 | L27del | TTG | --- | 3 | 3 | AY.25 | 0.000018 |
E | 27 | L27L | ttG | ttA | 2 | 3 | AY.42 | 0.00008 |
E | 27 | L27L | Ttg | Ctg | 1 | 3 | AY.42 | 0.00004 |
E | 27 | L27del | TTG | --- | 3 | 3 | AY.43 | 0.000013 |
E | 27 | L27F | ttG | ttT | 3 | 3 | AY.43 | 0.000013 |
E | 27 | L27V | Ttg | Gtg | 3 | 3 | AY.85 | 0.001282 |
E | 27 | L27R | TTG | CGT | 1 | 3 | AY.85 | 0.000427 |
E | 27 | L27R | TTG | CGC | 1 | 3 | AY.85 | 0.000427 |
E | 27 | L27R | TTg | CGg | 1 | 3 | AY.85 | 0.000427 |
E | 27 | L27F | ttG | ttT | 2 | 3 | B.1.177 | 0.000026 |
E | 27 | L27F | ttG | ttC | 1 | 3 | B.1.177 | 0.000013 |
E | 27 | L27L | ttG | ttA | 3 | 3 | B.1.177.7 | 0.000495 |
E | 27 | L27F | ttG | ttT | 3 | 3 | P.1 | 0.000047 |
E | 27 | L27del | TTG | --- | 2 | 2 | 0.111111 | |
E | 27 | L27P | TTg | CCg | 1 | 2 | 0.055556 | |
E | 27 | L27S | tTg | tCg | 1 | 2 | 0.055556 | |
E | 27 | L27P | TTG | CCA | 1 | 2 | 0.055556 | |
E | 27 | L27S | tTG | tCA | 1 | 2 | 0.055556 | |
E | 27 | L27G | TTG | GGA | 1 | 2 | All | 0 |
E | 27 | L27G | TTG | GGT | 1 | 2 | All | 0 |
E | 27 | L27P | TTG | CCA | 1 | 2 | All | 0 |
E | 27 | L27P | TTg | CCg | 1 | 2 | All | 0 |
E | 27 | L27R | TTG | CGT | 2 | 2 | AY.106 | 0.00067 |
E | 27 | L27S | tTg | tCg | 2 | 2 | AY.13 | 0.000322 |
E | 27 | L27del | TTG | --- | 2 | 2 | AY.39 | 0.000049 |
E | 27 | L27del | TTG | --- | 2 | 2 | AY.4 | 0.000003 |
E | 27 | L27L | Ttg | Ctg | 1 | 2 | AY.75 | 0.000056 |
E | 27 | L27L | ttG | ttA | 1 | 2 | AY.75 | 0.000056 |
E | 27 | L27F | ttG | ttT | 2 | 2 | AY.77 | 0.002255 |
E | 27 | L27S | tTg | tCg | 2 | 2 | AY.85 | 0.000854 |
E | 27 | L27G | TTG | GGA | 1 | 2 | AY.85 | 0.000427 |
E | 27 | L27G | TTG | GGT | 1 | 2 | AY.85 | 0.000427 |
E | 27 | L27F | ttG | ttT | 2 | 2 | B | 0.000256 |
E | 27 | L27F | ttG | ttT | 2 | 2 | B.1.1 | 0.000036 |
E | 27 | L27del1 | Ttg | -tg | 2 | 2 | B.1.1.7 | 0.000002 |
E | 27 | L27S | tTG | tCA | 1 | 2 | B.1.2 | 0.000009 |
E | 27 | L27S | tTg | tCg | 1 | 2 | B.1.2 | 0.000009 |
E | 27 | L27L | ttG | ttA | 2 | 2 | B.1.214.2 | 0.001199 |
E | 27 | L27S | tTg | tCg | 2 | 2 | B.1.221 | 0.000142 |
E | 27 | L27L | ttG | ttA | 2 | 2 | B.1.234 | 0.000264 |
E | 27 | L27S | tTg | tCg | 2 | 2 | B.1.258 | 0.000133 |
E | 27 | L27del | TTG | --- | 2 | 2 | B.1.525 | 0.000226 |
E | 27 | L27L | Ttg | Ctg | 1 | 2 | B.1.526 | 0.000024 |
E | 27 | L27L | ttG | ttA | 1 | 2 | B.1.526 | 0.000024 |
E | 27 | L27S | tTg | tCg | 2 | 2 | B.1.555 | 0.044444 |
E | 27 | L27L | ttG | ttA | 2 | 2 | B.6.6 | 0.001778 |
E | 27 | L27del | TTG | --- | 2 | 2 | C.37.1 | 0.005236 |
E | 27 | L27L | ttG | ttA | 1 | 2 | D.2 | 0.000075 |
E | 27 | L27L | Ttg | Ctg | 1 | 2 | D.2 | 0.000075 |
E | 27 | L27F | ttG | ttC | 1 | 1 | AD.2 | 0.000219 |
E | 27 | L27Q | TTG | CAA | 1 | 1 | All | 0 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.10 | 0.00053 |
E | 27 | L27Q | TTG | CAA | 1 | 1 | AY.102 | 0.000027 |
E | 27 | L27S | tTg | tCg | 1 | 1 | AY.102 | 0.000027 |
E | 27 | L27S | tTg | tCg | 1 | 1 | AY.103 | 0.000006 |
E | 27 | L27X | tTg | tAg | 1 | 1 | AY.103 | 0.000006 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.106 | 0.000335 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.118 | 0.000063 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.119 | 0.000035 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.120 | 0.000037 |
E | 27 | L27L | ttG | ttA | 1 | 1 | AY.120.1 | 0.000321 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.14 | 0.000088 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | AY.16.1 | 0.00047 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.20 | 0.000039 |
E | 27 | L27M | Ttg | Atg | 1 | 1 | AY.25 | 0.000006 |
E | 27 | L27del1 | TTG | -NN | 1 | 1 | AY.26 | 0.000028 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.26 | 0.000028 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.26 | 0.000028 |
E | 27 | L27L | ttG | ttA | 1 | 1 | AY.26 | 0.000028 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | AY.29 | 0.000016 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.29 | 0.000016 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | AY.33 | 0.000067 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.34.1 | 0.00051 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.35 | 0.000233 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | AY.36 | 0.000148 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | AY.39 | 0.000025 |
E | 27 | L27S | tTg | tCg | 1 | 1 | AY.4 | 0.000002 |
E | 27 | L27L | ttG | ttA | 1 | 1 | AY.4.5 | 0.000107 |
E | 27 | L27R | TTg | AGg | 1 | 1 | AY.42 | 0.00004 |
E | 27 | L27F | ttG | ttC | 1 | 1 | AY.46.6 | 0.000072 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.5 | 0.000021 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.54 | 0.000095 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.68 | 0.000274 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.70 | 0.000209 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.75 | 0.000056 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | AY.75.1 | 0.00018 |
E | 27 | L27M | Ttg | Atg | 1 | 1 | AY.85 | 0.000427 |
E | 27 | L27L | TtG | CtC | 1 | 1 | AY.85 | 0.000427 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.9.1 | 0.000084 |
E | 27 | L27F | ttG | ttC | 1 | 1 | AY.90 | 0.000684 |
E | 27 | L27F | ttG | ttT | 1 | 1 | AY.92 | 0.000287 |
E | 27 | L27del | TTG | --- | 1 | 1 | AY.95 | 0.000761 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B | 0.000128 |
E | 27 | L27M | Ttg | Atg | 1 | 1 | B.1 | 0.000009 |
E | 27 | L27T | TTG | ACC | 1 | 1 | B.1 | 0.000009 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1 | 0.000009 |
E | 27 | L27T | TTG | ACC | 1 | 1 | B.1.1 | 0.000018 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.1 | 0.000018 |
E | 27 | L27V | Ttg | Gtg | 1 | 1 | B.1.1 | 0.000018 |
E | 27 | L27del1 | Ttg | -tg | 1 | 1 | B.1.1 | 0.000018 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.1.194 | 0.00495 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.1.214 | 0.000055 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.1.216 | 0.00089 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.1.218 | 0.007692 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.1.27 | 0.00565 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.1.294 | 0.001266 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | B.1.1.318 | 0.000302 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.1.354 | 0.004386 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.1.409 | 0.002833 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.1.519 | 0.00004 |
E | 27 | L27del1 | ttG | tt- | 1 | 1 | B.1.1.519 | 0.00004 |
E | 27 | L27T | TTG | ACC | 1 | 1 | B.1.1.7 | 0.000001 |
E | 27 | L27V | Ttg | Gtg | 1 | 1 | B.1.1.7 | 0.000001 |
E | 27 | L27F | ttG | ttC | 1 | 1 | B.1.1.8 | 0.003584 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.126 | 0.001276 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.147 | 0.000756 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.157 | 0.002985 |
E | 27 | L27V | Ttg | Gtg | 1 | 1 | B.1.177 | 0.000013 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.177 | 0.000013 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.177.44 | 0.000519 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.177.57 | 0.000281 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.177.87 | 0.000728 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.182 | 0.007246 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.214 | 0.003663 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.218 | 0.005155 |
E | 27 | L27F | ttG | ttC | 1 | 1 | B.1.221 | 0.000071 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.221 | 0.000071 |
E | 27 | L27del1 | ttG | tt- | 1 | 1 | B.1.232 | 0.000537 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.234 | 0.000132 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.234 | 0.000132 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.236 | 0.002053 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.241 | 0.000812 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.258 | 0.000067 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.258.16 | 0.001637 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.311 | 0.000275 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.351 | 0.00003 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.36 | 0.000146 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.369 | 0.000285 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.369 | 0.000285 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.429 | 0.000024 |
E | 27 | L27X | tTg | tAg | 1 | 1 | B.1.429 | 0.000024 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.429 | 0.000024 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | B.1.469 | 0.00361 |
E | 27 | L27V | Ttg | Gtg | 1 | 1 | B.1.497 | 0.000315 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.515 | 0.014493 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.524 | 0.001406 |
E | 27 | L27X | tTg | tAg | 1 | 1 | B.1.544 | 0.006024 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.1.568 | 0.001111 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.609 | 0.000479 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.617.1 | 0.000129 |
E | 27 | L27F | ttG | ttT | 1 | 1 | B.1.617.2 | 0.000004 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.621 | 0.000089 |
E | 27 | L27V | Ttg | Gtg | 1 | 1 | B.1.621 | 0.000089 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.627 | 0.00202 |
E | 27 | L27del | TTG | --- | 1 | 1 | B.1.638 | 0.052632 |
E | 27 | L27L | ttG | ttA | 1 | 1 | B.1.94 | 0.027027 |
E | 27 | L27S | tTg | tCg | 1 | 1 | B.38 | 0.02381 |
E | 27 | L27del | TTG | --- | 1 | 1 | P.1.13 | 0.000898 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | P.1.14 | 0.000048 |
E | 27 | L27F | ttG | ttT | 1 | 1 | P.1.14 | 0.000048 |
E | 27 | L27del | TTG | --- | 1 | 1 | P.1.7 | 0.000319 |
E | 27 | L27del | TTG | --- | 1 | 1 | Q.2 | 0.000613 |
E | 27 | L27L | Ttg | Ctg | 1 | 1 | Q.8 | 0.000165 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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