Table of countries and their respective (filtered) sequence count for the lineage 'AY.7.2'.
Lineage | Country | Count | EarliestEpiWeek | LatestEpiWeek | View Mutations | 72 | 73 | 74 | 75 | 76 | 77 | 78 | 79 | 80 | 81 | 82 | 83 | 84 | 85 | 86 | 87 | 88 | 89 | 90 | 91 | 92 | 93 | 94 | 95 | 96 | 97 | 98 | 99 |
AY.7.2 | All | 1788 | 72 | 99 | Mutations | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 27 | 118 | 275 | 226 | 217 | 159 | 149 | 87 | 89 | 83 | 89 | 49 | 48 | 35 | 47 | 35 | 26 | 13 | 4 | 1 |
AY.7.2 | ITALY | 606 | 79 | 97 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 54 | 124 | 107 | 92 | 47 | 61 | 30 | 25 | 8 | 20 | 8 | 6 | 3 | 3 | 3 | 1 | 8 | 0 | 0 | |
AY.7.2 | GERMANY | 264 | 79 | 98 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 12 | 36 | 18 | 15 | 26 | 14 | 16 | 14 | 25 | 12 | 17 | 5 | 9 | 16 | 13 | 8 | 2 | 1 | 0 | |
AY.7.2 | SLOVENIA | 157 | 80 | 91 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 14 | 37 | 54 | 27 | 13 | 0 | 6 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | FRANCE | 153 | 79 | 98 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 24 | 46 | 14 | 10 | 4 | 3 | 6 | 0 | 1 | 6 | 3 | 3 | 5 | 7 | 5 | 7 | 2 | 1 | 0 | |
AY.7.2 | SWITZERLAND | 148 | 79 | 95 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 10 | 17 | 16 | 19 | 23 | 20 | 6 | 6 | 1 | 6 | 5 | 5 | 2 | 3 | 3 | 0 | 0 | 0 | 0 | |
AY.7.2 | DENMARK | 90 | 81 | 91 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 13 | 15 | 12 | 8 | 8 | 12 | 11 | 4 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | GREECE | 64 | 82 | 92 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | 8 | 2 | 1 | 0 | 0 | 7 | 15 | 10 | 3 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | POLAND | 43 | 79 | 96 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 8 | 0 | 4 | 4 | 6 | 2 | 3 | 4 | 3 | 2 | 2 | 0 | 0 | 0 | |
AY.7.2 | UK-ENGLAND | 40 | 81 | 98 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 1 | 3 | 1 | 4 | 4 | 3 | 2 | 3 | 2 | 5 | 0 | 0 | 4 | 0 | 1 | 2 | 0 | |
AY.7.2 | SWEDEN | 40 | 82 | 96 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 2 | 7 | 5 | 9 | 5 | 7 | 0 | 0 | 0 | |
AY.7.2 | NETHERLANDS | 39 | 83 | 96 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 8 | 11 | 2 | 3 | 3 | 2 | 2 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |
AY.7.2 | NORWAY | 26 | 82 | 94 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 1 | 0 | 0 | 2 | 7 | 5 | 1 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | BELGIUM | 20 | 80 | 99 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 5 | 3 | 4 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | |
AY.7.2 | USA | 19 | 80 | 94 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 5 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 4 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | CZECH_REPUBLIC | 12 | 81 | 90 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | IRELAND | 9 | 82 | 88 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | LITHUANIA | 9 | 85 | 94 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 1 | 0 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | LUXEMBOURG | 7 | 80 | 94 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | SPAIN | 6 | 79 | 88 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | SLOVAKIA | 5 | 81 | 88 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | ISRAEL | 4 | 80 | 87 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | AUSTRIA | 4 | 81 | 90 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | ROMANIA | 4 | 88 | 90 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | KOSOVO | 4 | 89 | 90 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | UK-NORTHERN_IRELAND | 3 | 80 | 81 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | INDIA | 2 | 72 | 77 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | PORTUGAL | 2 | 81 | 87 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | JAPAN | 2 | 81 | 82 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | FINLAND | 2 | 83 | 83 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | UK-SCOTLAND | 1 | 80 | 80 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | BOSNIA_AND_HERZEGOVINA | 1 | 84 | 84 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | RUSSIA | 1 | 90 | 90 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
AY.7.2 | THAILAND | 1 | 92 | 92 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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