CoV-GLUE Lineage

CoV-GLUE Lineage: AY.63

Table of countries and their respective (filtered) sequence count for the lineage 'AY.63'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98
AY.63	All	2585	75	98	Mutations	1	1	1	16	129	239	207	192	228	190	170	121	171	205	184	129	119	121	54	37	14	39	12	5
AY.63	NORWAY	2416	76	98		0	1	1	16	124	225	199	185	223	183	168	115	163	200	168	114	108	103	46	19	5	34	12	4
AY.63	SLOVAKIA	61	80	96		0	0	0	0	0	1	0	0	2	0	0	0	5	2	5	7	7	10	7	12	2	1	0	0
AY.63	ITALY	20	79	92		0	0	0	0	5	8	5	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0
AY.63	SWEDEN	20	80	96		0	0	0	0	0	2	0	1	0	1	0	0	0	1	3	4	0	2	0	2	2	2	0	0
AY.63	INDIA	16	75	93		1	0	0	0	0	0	0	1	0	3	1	1	0	0	6	1	0	1	1	0	0	0	0	0
AY.63	UK-ENGLAND	10	84	98		0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	2	3	1	0	1
AY.63	USA	8	87	96		0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	2	0	2	0	1	0	0
AY.63	DENMARK	8	80	89		0	0	0	0	0	1	0	0	2	1	0	0	0	2	2	0	0	0	0	0	0	0	0	0
AY.63	SWITZERLAND	6	81	84		0	0	0	0	0	0	2	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.63	GERMANY	5	90	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	2	0	0	0
AY.63	POLAND	3	82	87		0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
AY.63	SPAIN	3	83	86		0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
AY.63	CZECH_REPUBLIC	2	87	92		0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0
AY.63	JAPAN	2	85	86		0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.63	FINLAND	2	80	80		0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.63	UK-SCOTLAND	1	91	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
AY.63	BULGARIA	1	86	86		0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.63	BELGIUM	1	81	81		0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.