CoV-GLUE Lineage

CoV-GLUE Lineage: AY.51

Table of countries and their respective (filtered) sequence count for the lineage 'AY.51'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98
AY.51	All	1100	67	98	Mutations	1	1	1	1	0	3	0	2	1	0	3	2	1	8	23	36	63	96	137	113	67	78	58	52	32	28	19	45	58	77	69	12
AY.51	GERMANY	296	81	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	14	16	10	6	5	5	8	15	14	9	32	44	47	57	10
AY.51	FRANCE	180	80	97		0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	9	8	15	20	36	24	14	11	8	3	4	2	3	1	4	1	0
AY.51	BELGIUM	149	81	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	7	14	22	33	18	17	22	11	2	0	0	0	0	0	0	0	0
AY.51	USA	135	75	95		0	0	0	0	0	0	0	0	1	0	1	1	0	2	5	11	15	17	15	8	3	15	14	9	4	1	5	4	4	0	0	0
AY.51	SWITZERLAND	86	81	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	2	7	5	1	0	2	5	4	4	2	1	5	5	23	11	2
AY.51	DENMARK	60	83	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	16	11	3	4	1	10	5	2	0	0	1	0	0	0
AY.51	UK-ENGLAND	34	80	96		0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	8	6	5	3	1	2	2	0	0	0	0	1	0	1	0	0
AY.51	SWEDEN	25	83	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	10	7	1	2	1	0	0	0	0	0	0	0	0	0
AY.51	ITALY	24	83	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	3	3	6	1	4	0	0	1	0	0	2	0	0
AY.51	NETHERLANDS	20	84	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	4	2	1	2	1	4	0	0	0	0	0	0
AY.51	SPAIN	16	85	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	4	2	4	0	0	0	0	0	0	0	0	0
AY.51	INDIA	15	67	93		1	0	1	1	0	3	0	2	0	0	1	0	0	1	0	0	0	0	0	2	0	1	0	1	0	0	1	0	0	0	0	0
AY.51	CANADA	15	68	85		0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	TURKEY	10	83	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	6	0	0	0	0	1	0	1	0	0	1	0	0	0
AY.51	NIGERIA	7	79	85		0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	MOROCCO	6	77	89		0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
AY.51	CZECH_REPUBLIC	5	86	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	2	0	0	0	0	0	0	0	0
AY.51	PORTUGAL	3	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	UK-WALES	2	82	82		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	CANARY_ISLANDS	2	87	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0
AY.51	CROATIA	2	95	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
AY.51	GIBRALTAR	1	85	85		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	ICELAND	1	78	78		0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	BENIN	1	81	81		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	LUXEMBOURG	1	84	84		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	ISRAEL	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	KENYA	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.51	FINLAND	1	88	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
AY.51	UK-SCOTLAND	1	82	82		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.