CoV-GLUE Lineage

CoV-GLUE Lineage: AY.4.4

Table of countries and their respective (filtered) sequence count for the lineage 'AY.4.4'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99
AY.4.4	All	2444	63	99	Mutations	1	0	0	0	0	0	1	0	1	0	0	1	4	3	3	2	9	3	26	24	80	133	173	238	232	258	231	219	166	156	131	114	69	83	59	20	2
AY.4.4	BULGARIA	775	79	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	9	44	73	92	101	91	79	52	60	49	64	36	17	0	2	0	0	0
AY.4.4	GERMANY	574	71	98		0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	2	15	30	44	75	79	69	63	39	28	30	35	27	29	7	0
AY.4.4	UK-ENGLAND	206	79	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	2	3	8	31	19	22	24	21	12	10	11	5	8	8	8	9	0
AY.4.4	DENMARK	161	81	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	5	4	8	22	39	41	16	5	4	1	1	1	0	0	2	2	1	0
AY.4.4	SLOVAKIA	112	63	96		1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	2	1	5	3	7	15	16	21	4	6	7	14	6	1	0	0	0
AY.4.4	CZECH_REPUBLIC	95	81	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	1	4	4	15	16	11	1	6	7	8	8	4	4	0	0
AY.4.4	BELGIUM	77	82	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	7	5	9	10	4	6	1	1	6	2	4	7	3	10	0	0	0
AY.4.4	BANGLADESH	58	75	94		0	0	0	0	0	0	0	0	0	0	0	0	2	1	3	0	4	1	3	0	5	7	1	4	2	5	4	5	1	4	3	3	0	0	0	0	0
AY.4.4	FRANCE	58	78	99		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	6	1	1	0	0	0	2	3	4	4	4	2	4	4	4	11	3	1	2
AY.4.4	SWEDEN	41	88	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	5	2	3	16	9	0	1	2	0	0
AY.4.4	POLAND	34	82	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	3	2	7	2	4	3	1	1	2	0	5	1	0	0
AY.4.4	NETHERLANDS	33	83	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	2	5	3	6	3	1	2	1	2	0	1	0	0	0
AY.4.4	UK-WALES	31	87	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	10	7	2	3	2	0	3	1	0
AY.4.4	ITALY	29	87	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	0	6	4	6	1	3	5	0	0
AY.4.4	ISRAEL	27	82	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	13	3	3	0	0	0	0	0	0	0	1	0	0	0	0	0
AY.4.4	SWITZERLAND	22	81	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	4	3	2	0	0	2	0	0	0	2	2	0	2	2	0	0
AY.4.4	INDIA	16	69	94		0	0	0	0	0	0	1	0	0	0	0	1	2	0	0	1	1	0	0	1	1	0	4	0	1	1	0	0	0	0	1	1	0	0	0	0	0
AY.4.4	USA	15	79	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	5	3	2	1	0	0	0	0	0	0	0	0
AY.4.4	AUSTRIA	12	83	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	1	0	1	4	1	0	0	0	1	0	0	0	0
AY.4.4	ROMANIA	11	83	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	2	0	2	0	1	1	1	0	1	0	0	0	0
AY.4.4	SPAIN	9	88	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	1	1	0	0	0	2	0	0	0
AY.4.4	LITHUANIA	8	85	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	1	0	2	0	0	0	0	0	0	0	0
AY.4.4	NORWAY	6	85	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	1	0	0	0	0	0	0	0	0	0	0
AY.4.4	CROATIA	6	89	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	0	0	0	0	0	0
AY.4.4	PORTUGAL	5	81	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
AY.4.4	UK-SCOTLAND	5	83	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	1	0
AY.4.4	CANADA	5	82	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
AY.4.4	FINLAND	2	84	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.4	IRELAND	2	90	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
AY.4.4	INDONESIA	2	84	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
AY.4.4	LUXEMBOURG	2	87	87		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.4	BAHRAIN	1	82	82		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.4	TURKEY	1	89	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
AY.4.4	GREECE	1	89	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
AY.4.4	BOSNIA_AND_HERZEGOVINA	1	93	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
AY.4.4	SLOVENIA	1	93	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.