CoV-GLUE Lineage

CoV-GLUE Lineage: AY.4.3

Table of countries and their respective (filtered) sequence count for the lineage 'AY.4.3'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98
AY.4.3	All	1188	71	98	Mutations	1	0	1	0	1	0	0	3	3	3	3	3	11	25	59	88	128	116	144	122	91	102	93	78	48	44	15	5
AY.4.3	GERMANY	295	71	97		1	0	1	0	1	0	0	0	0	0	0	0	0	5	4	22	60	39	45	37	25	19	13	7	7	5	4	0
AY.4.3	IRELAND	182	82	97		0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	7	6	12	39	29	13	32	24	8	1	7	1	0
AY.4.3	SWITZERLAND	158	83	97		0	0	0	0	0	0	0	0	0	0	0	0	2	6	8	18	6	17	12	15	11	7	2	15	14	18	7	0
AY.4.3	SWEDEN	96	84	93		0	0	0	0	0	0	0	0	0	0	0	0	0	1	29	21	14	16	8	2	3	1	1	0	0	0	0	0
AY.4.3	BULGARIA	89	85	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	10	17	6	5	5	13	10	18	3	0	0	0	0
AY.4.3	SLOVENIA	65	83	94		0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	2	0	1	1	1	5	12	18	18	0	0	0	0
AY.4.3	UK-ENGLAND	50	78	98		0	0	0	0	0	0	0	1	3	3	2	2	1	1	0	1	5	4	5	2	2	2	3	3	2	2	0	5
AY.4.3	NORWAY	46	88	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	1	2	8	3	12	12	2	0	0
AY.4.3	BELGIUM	39	84	96		0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	6	2	9	7	2	0	0	4	2	3	0	0
AY.4.3	DENMARK	28	83	96		0	0	0	0	0	0	0	0	0	0	0	0	5	0	5	1	4	3	6	1	1	0	0	0	0	2	0	0
AY.4.3	ITALY	26	87	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	4	7	8	2	2	0	1	0	0
AY.4.3	FRANCE	16	85	96		0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	5	3	0	0	0	0	0	0	3	0	0
AY.4.3	USA	12	84	97		0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	0	1	0	0	2	3	0	2	0
AY.4.3	CROATIA	11	89	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	4	0	0	1	0	0	0	0
AY.4.3	SPAIN	8	88	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	3	0	1	1	1	0
AY.4.3	AUSTRIA	7	85	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	3	0	1	0	0	0	0	0	0
AY.4.3	BOSNIA_AND_HERZEGOVINA	7	90	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	2	0	0	0	0	0
AY.4.3	FINLAND	6	78	89		0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	3	0	1	0	0	0	0	0	0	0	0	0
AY.4.3	NETHERLANDS	6	84	95		0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	2	0	2	0	0	0
AY.4.3	CZECH_REPUBLIC	6	88	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0
AY.4.3	POLAND	5	86	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	1	1	0	0	0	0	0
AY.4.3	RUSSIA	4	89	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	2	0	0	0	0
AY.4.3	ANGOLA	4	90	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0
AY.4.3	KOSOVO	4	83	86		0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.3	UK-SCOTLAND	4	93	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0
AY.4.3	LUXEMBOURG	2	88	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0
AY.4.3	LITHUANIA	2	81	84		0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.3	ICELAND	2	83	87		0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
AY.4.3	CHILE	1	94	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
AY.4.3	INDIA	1	78	78		0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.3	ECUADOR	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.3	CANADA	1	90	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
AY.4.3	ROMANIA	1	90	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
AY.4.3	JAPAN	1	90	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
AY.4.3	PUERTO_RICO	1	85	85		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.3	GREECE	1	89	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.