CoV-GLUE Lineage

CoV-GLUE Lineage: AY.4.1

Table of countries and their respective (filtered) sequence count for the lineage 'AY.4.1'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98
AY.4.1	All	1356	78	98	Mutations	40	73	73	51	64	78	50	45	66	105	146	124	113	88	53	39	28	26	22	33	18
AY.4.1	UK-SCOTLAND	697	78	98		31	57	43	14	24	33	11	13	32	58	106	89	65	53	18	11	4	3	16	11	4
AY.4.1	UK-ENGLAND	493	78	98		9	16	20	14	19	26	24	14	19	32	27	28	42	34	34	27	24	23	6	21	14
AY.4.1	IRELAND	126	80	93		0	0	10	21	20	13	11	14	8	11	8	6	2	1	0	1	0	0	0	0	0
AY.4.1	UK-WALES	14	82	97		0	0	0	0	1	0	0	1	0	2	4	1	4	0	0	0	0	0	0	1	0
AY.4.1	UK-NORTHERN_IRELAND	8	83	86		0	0	0	0	0	3	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	FINLAND	7	83	85		0	0	0	0	0	2	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	GIBRALTAR	3	81	83		0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	AUSTRALIA	2	86	87		0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	CZECH_REPUBLIC	2	88	92		0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0
AY.4.1	POLAND	1	86	86		0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	ICELAND	1	86	86		0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	USA	1	87	87		0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
AY.4.1	SWEDEN	1	84	84		0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.