CoV-GLUE Lineage

CoV-GLUE Lineage: AY.14

Table of countries and their respective (filtered) sequence count for the lineage 'AY.14'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98
AY.14	All	11362	66	98	Mutations	1	0	0	4	5	23	13	12	17	35	66	71	205	289	592	848	1106	1358	1580	1193	797	653	573	508	352	235	204	175	137	126	103	60	15
AY.14	USA	10879	66	98		1	0	0	3	5	23	13	10	17	35	65	69	204	272	585	837	1085	1329	1526	1156	730	608	528	474	317	213	195	164	130	123	100	48	12
AY.14	PHILIPPINES	119	77	86		0	0	0	0	0	0	0	0	0	0	0	2	1	12	6	4	10	21	38	11	14	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	GERMANY	89	83	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	8	12	15	13	15	6	4	1	5	1	1	0	0	0
AY.14	SWITZERLAND	66	84	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	9	20	2	6	4	10	11	1	1	0	0	0	0	0
AY.14	ITALY	37	85	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	14	6	1	2	0	1	2	2	0	1	2	0
AY.14	UK-ENGLAND	23	76	97		0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	3	1	6	2	1	1	0	2	2	1	1	0
AY.14	CANADA	22	69	90		0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	4	2	2	2	6	0	2	1	2	0	0	0	0	0	0	0	0
AY.14	DENMARK	19	85	98		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	1	0	0	1	9	3
AY.14	AUSTRIA	12	81	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	2	7	0	0	0	0	0	0	0	0
AY.14	MEXICO	11	79	88		0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	3	1	4	0	0	0	0	0	0	0	0	0	0
AY.14	JAPAN	10	83	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	3	0	1	0	0	0	0	1	0	0	0	0	0
AY.14	PUERTO_RICO	8	79	84		0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	BELGIUM	8	86	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	0	1	0	2	0	0	0	0
AY.14	GREECE	8	88	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	3	0	0	0	0	0	0	0
AY.14	SLOVENIA	7	87	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	1	0	1	1	0	0	0	0	0
AY.14	FRANCE	5	86	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0
AY.14	INDIA	4	73	91		0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
AY.14	SWEDEN	3	87	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0
AY.14	NORWAY	3	81	82		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	NETHERLANDS	3	87	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0
AY.14	COLOMBIA	3	88	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0
AY.14	NORTH_MACEDONIA	2	81	82		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	TURKEY	2	87	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0
AY.14	HONG_KONG	2	88	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
AY.14	LUXEMBOURG	2	87	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0
AY.14	BELIZE	2	82	84		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	ISRAEL	2	88	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
AY.14	SOUTH_AFRICA	1	81	81		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	SINT_MAARTEN	1	82	82		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	TURKS_AND_CAICOS_ISLANDS	1	81	81		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	ARUBA	1	83	83		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	ECUADOR	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	SLOVAKIA	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	BANGLADESH	1	84	84		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.14	NEW_ZEALAND	1	90	90		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
AY.14	SPAIN	1	92	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
AY.14	SEYCHELLES	1	91	91		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
AY.14	FINLAND	1	88	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.