CoV-GLUE Lineage

CoV-GLUE Lineage: AY.115

Table of countries and their respective (filtered) sequence count for the lineage 'AY.115'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97
AY.115	All	192	69	97	Mutations	1	0	0	0	0	0	5	0	15	1	4	0	4	24	11	1	10	7	37	12	11	5	20	4	10	3	5	1	1
AY.115	BOTSWANA	164	75	95		0	0	0	0	0	0	5	0	15	1	1	0	1	17	10	1	8	4	35	11	11	5	20	2	10	3	4	0	0
AY.115	AUSTRALIA	6	81	82		0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.115	SOUTH_AFRICA	4	85	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	0	0	0	0
AY.115	BELGIUM	4	79	82		0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.115	SLOVENIA	3	85	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0
AY.115	NETHERLANDS	3	95	97		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1
AY.115	INDIA	2	69	87		1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
AY.115	USA	2	82	87		0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
AY.115	AUSTRIA	1	81	81		0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.115	ITALY	1	83	83		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.115	SWEDEN	1	79	79		0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.115	FRANCE	1	92	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.