CoV-GLUE Lineage

CoV-GLUE Lineage: AY.10

Table of countries and their respective (filtered) sequence count for the lineage 'AY.10'.

Lineage	Country	Count	EarliestEpiWeek	LatestEpiWeek	View Mutations	55	56	57	58	59	60	61	62	63	64	65	66	67	68	69	70	71	72	73	74	75	76	77	78	79	80	81	82	83	84	85	86	87	88	89	90	91	92	93	94	95	96	97	98	99
AY.10	All	1887	55	99	Mutations	1	0	0	0	0	0	0	0	0	0	1	4	4	21	30	16	40	107	191	186	147	131	163	153	199	97	49	32	28	13	12	27	25	27	11	9	24	20	13	3	15	4	1	2	1
AY.10	UK-ENGLAND	1039	68	93		0	0	0	0	0	0	0	0	0	0	0	0	0	2	12	7	17	55	100	139	121	91	110	90	102	60	25	20	8	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
AY.10	UK-WALES	236	71	84		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	10	10	12	11	14	24	37	75	23	7	1	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	CANADA	159	68	80		0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	3	16	48	21	3	21	25	13	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	INDIA	130	55	90		1	0	0	0	0	0	0	0	0	0	1	4	4	7	9	7	9	20	16	10	5	2	0	4	9	2	0	1	2	0	5	5	1	0	4	1	0	0	0	0	0	0	0	0	0
AY.10	USA	126	68	98		0	0	0	0	0	0	0	0	0	0	0	0	0	9	1	0	1	2	3	1	0	0	1	0	2	0	2	2	4	1	0	7	13	15	4	7	11	14	10	1	9	3	0	2	0
AY.10	BELGIUM	42	79	95		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	6	2	2	1	1	1	1	3	1	0	9	3	0	0	6	0	0	0	0
AY.10	GERMANY	37	68	90		0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	4	3	6	2	7	3	0	1	0	0	0	0	0	1	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0
AY.10	UK-SCOTLAND	21	73	94		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	2	4	5	3	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
AY.10	FRANCE	18	78	99		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	3	1	0	0	4	1	1	1	0	1	1	0	1
AY.10	DENMARK	13	84	89		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	5	1	1	1	0	0	0	0	0	0	0	0	0	0
AY.10	TURKEY	12	83	92		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	2	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
AY.10	SOUTH_AFRICA	9	78	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	2	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0
AY.10	SWEDEN	6	77	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
AY.10	ECUADOR	4	80	81		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	FINLAND	4	81	85		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	KAZAKHSTAN	4	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	UK-NORTHERN_IRELAND	3	73	73		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	POLAND	3	87	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0
AY.10	IRELAND	2	69	73		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	QATAR	2	69	74		0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	NETHERLANDS	2	79	87		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	OMAN	2	73	78		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	SPAIN	2	82	93		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
AY.10	MEXICO	1	72	72		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	SWITZERLAND	1	81	81		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	ITALY	1	81	81		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	GIBRALTAR	1	85	85		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	SLOVENIA	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	AUSTRIA	1	87	87		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	CURACAO	1	88	88		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
AY.10	CHILE	1	87	87		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	SIERRA_LEONE	1	78	78		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	BANGLADESH	1	84	84		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AY.10	PHILIPPINES	1	86	86		0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.