CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
383S220271551G

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
B.1.617.2990.25848563968668
AY.119960.25065274151436
AY.102450.11749347258486
AY.61430.11227154046997
AY.20160.04177545691906
AY.2690.023498694516971
AY.7180.02088772845953
AY.4460.015665796344648
AY.10350.013054830287206
AY.7750.013054830287206
AY.12040.010443864229765
AY.75.140.010443864229765
AY.1640.010443864229765
AY.340.010443864229765
AY.10130.0078328981723238
AY.4620.0052219321148825
AY.10820.0052219321148825
AY.5420.0052219321148825
AY.7420.0052219321148825
AY.4120.0052219321148825
AY.10620.0052219321148825
AY.5620.0052219321148825
AY.8810.0026109660574413
AY.4310.0026109660574413
AY.10710.0026109660574413
AY.4210.0026109660574413
AY.3910.0026109660574413
AY.10010.0026109660574413
AY.9.210.0026109660574413
AY.110.0026109660574413
AY.5210.0026109660574413
AY.4810.0026109660574413
AY.9910.0026109660574413
AY.3310.0026109660574413
AY.5.310.0026109660574413
AY.1010.0026109660574413
AY.5910.0026109660574413
AY.99.210.0026109660574413
AY.6910.0026109660574413

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.