CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
183ORF1ab/nsp337783531G

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
AY.43340.18579234972678
AY.39160.087431693989071
AY.12160.087431693989071
AY.121110.060109289617486
AY.10290.049180327868852
AY.590.049180327868852
AY.2660.032786885245902
AY.460.032786885245902
AY.4460.032786885245902
AY.3340.021857923497268
AY.98.140.021857923497268
AY.10340.021857923497268
B.1.617.230.016393442622951
AY.8430.016393442622951
AY.2020.010928961748634
AY.9820.010928961748634
AY.10620.010928961748634
AY.920.010928961748634
AY.5110.0054644808743169
AY.7010.0054644808743169
AY.6110.0054644808743169
AY.11610.0054644808743169
AY.12010.0054644808743169
AY.11710.0054644808743169
AY.3610.0054644808743169
AY.5.410.0054644808743169
AY.46.610.0054644808743169
AY.110.0054644808743169
AY.6010.0054644808743169
AY.75.110.0054644808743169
AY.11910.0054644808743169
AY.4910.0054644808743169
AY.2510.0054644808743169
AY.4610.0054644808743169
AY.16.110.0054644808743169
AY.2310.0054644808743169
AY.4.510.0054644808743169
AY.9.210.0054644808743169
B.1.1.710.0054644808743169

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.