CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
202noncoding2372371T

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
B.1.617.2770.38118811881188
AY.43320.15841584158416
B.1.400100.04950495049505
AY.2590.044554455445545
AY.4490.044554455445545
B.1.290.044554455445545
B.150.024752475247525
B.1.1.750.024752475247525
AY.4640.01980198019802
AY.3940.01980198019802
AY.11030.014851485148515
B.1.42930.014851485148515
AY.10230.014851485148515
B.1.1.1610.004950495049505
B.1.24310.004950495049505
B.1.21210.004950495049505
AY.3610.004950495049505
AY.2610.004950495049505
AY.10010.004950495049505
B.1.59510.004950495049505
B.1.12810.004950495049505
B.1.62810.004950495049505
B.1.1.2810.004950495049505
B.1.28410.004950495049505
AY.11910.004950495049505
AY.9810.004950495049505
AY.9.210.004950495049505
AY.9110.004950495049505
AY.410.004950495049505
B.1.619.110.004950495049505
AY.6110.004950495049505
AY.2910.004950495049505
B10.004950495049505
B.1.1.3310.004950495049505
AY.3410.004950495049505
B.1.110.004950495049505
B.1.62110.004950495049505
AY.9210.004950495049505
P.1.1010.004950495049505
AY.310.004950495049505
P.1.1410.004950495049505

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.