CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
217ORF7b27791111T

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
AY.4940.4331797235023
Q.1120.055299539170507
B.1.1.7110.050691244239631
B.1.59570.032258064516129
B.1.617.270.032258064516129
B.160.027649769585253
AY.4460.027649769585253
AY.5.460.027649769585253
B.1.250.023041474654378
AY.4350.023041474654378
AY.2550.023041474654378
AY.2640.018433179723502
B.1.62740.018433179723502
AY.3630.013824884792627
P.1.730.013824884792627
AY.2930.013824884792627
B.1.42730.013824884792627
AY.330.013824884792627
AY.11830.013824884792627
AY.1420.0092165898617512
AY.10320.0092165898617512
AY.2320.0092165898617512
D.220.0092165898617512
AY.7420.0092165898617512
B.1.258.1710.0046082949308756
AY.9810.0046082949308756
B.1.56410.0046082949308756
B.1.32510.0046082949308756
AY.99.210.0046082949308756
AY.510.0046082949308756
B.1.1.27910.0046082949308756
AY.46.410.0046082949308756
AY.7510.0046082949308756
B.1.35110.0046082949308756
AY.4.210.0046082949308756
AY.6010.0046082949308756
AY.9110.0046082949308756
B.1.59610.0046082949308756
AY.2010.0046082949308756

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.