CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
110noncoding767614AAATATTATATTAG

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
B.1.1.7150.13636363636364
AY.43100.090909090909091
P.180.072727272727273
AY.480.072727272727273
AY.580.072727272727273
AY.2360.054545454545455
B.1.617.240.036363636363636
AY.3340.036363636363636
AY.46.630.027272727272727
B30.027272727272727
AY.4620.018181818181818
AY.9.220.018181818181818
AY.9.120.018181818181818
AY.6020.018181818181818
B.1.42920.018181818181818
AY.1320.018181818181818
AY.3910.0090909090909091
AY.8810.0090909090909091
B.110.0090909090909091
B.1.52610.0090909090909091
AY.10210.0090909090909091
AY.2510.0090909090909091
AY.11610.0090909090909091
AY.98.110.0090909090909091
AY.3410.0090909090909091
AY.9410.0090909090909091
Q.310.0090909090909091
B.1.36.1010.0090909090909091
B.1.210.0090909090909091
AY.2610.0090909090909091
AY.4710.0090909090909091
AY.120.2.110.0090909090909091
P.1.810.0090909090909091
AY.75.110.0090909090909091
P.1.110.0090909090909091
AY.10310.0090909090909091
AY.4110.0090909090909091
AY.7.110.0090909090909091
AY.4210.0090909090909091

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.