CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
3445ORF8282141061T

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
AY.321930.63657474600871
AY.3.15880.17068214804064
AY.41400.040638606676343
B.1.617.2480.013933236574746
AY.5.3380.011030478955007
B.1.1.7380.011030478955007
AY.6350.010159651669086
B.1.177330.0095791001451379
AY.44260.0075471698113208
AY.25230.0066763425253991
AY.36210.0060957910014514
AY.117180.0052249637155298
AY.103150.0043541364296081
B.1.2140.0040638606676343
B.1.409110.0031930333817126
B.1110.0031930333817126
AY.102110.0031930333817126
AY.11980.002322206095791
AY.4380.002322206095791
AY.580.002322206095791
B50.0014513788098694
AY.10550.0014513788098694
B.1.177.4450.0014513788098694
P.150.0014513788098694
AY.4540.0011611030478955
AY.3940.0011611030478955
AY.46.640.0011611030478955
AY.3340.0011611030478955
AY.9240.0011611030478955
AY.11330.00087082728592163
D.230.00087082728592163
AY.9830.00087082728592163
AY.11630.00087082728592163
B.1.35130.00087082728592163
B.1.130.00087082728592163
AY.39.130.00087082728592163
B.1.63730.00087082728592163
AY.5320.00058055152394775
AY.2620.00058055152394775
B.1.59620.00058055152394775
AY.10020.00058055152394775
AY.5920.00058055152394775
B.1.1320.00058055152394775
AY.12020.00058055152394775
P.1.1420.00058055152394775
C.3720.00058055152394775
B.1.58220.00058055152394775
AY.4720.00058055152394775
A10.00029027576197388
AY.2910.00029027576197388
AY.11810.00029027576197388
AY.11010.00029027576197388
AY.8410.00029027576197388
B.1.24110.00029027576197388
P.1.1610.00029027576197388
AY.2310.00029027576197388
B.1.45610.00029027576197388
B.1.1.13410.00029027576197388
AY.4.210.00029027576197388
AY.10610.00029027576197388
AY.1910.00029027576197388
AY.5810.00029027576197388
B.1.42910.00029027576197388
AY.9510.00029027576197388
B.1.20610.00029027576197388
B.1.177.8310.00029027576197388
AY.2010.00029027576197388
N.310.00029027576197388
AY.4110.00029027576197388
AY.9110.00029027576197388
AY.4210.00029027576197388
AY.3710.00029027576197388
AY.910.00029027576197388
AY.7710.00029027576197388
AY.1410.00029027576197388
B.1.58010.00029027576197388
AY.116.110.00029027576197388
B.1.177.1710.00029027576197388
AU.310.00029027576197388

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.