CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
31137ORF8282511182TG

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
B.1.1.7273340.87786235025853
B.1.63714910.047885152712207
D.21790.0057487876160195
B.1.5261740.0055882069563542
B.1.21670.0053633940328227
B.11390.0044641423386967
B.1.177.541360.0043677939428975
B.1.11260.0040466326235668
B.1.595490.0015736904647204
C.4440.0014131098050551
B.1.1.519410.0013167614092559
B.1.617.2340.0010919484857244
B.1.1.372330.0010598323537913
B.1.1.214280.00089925169412596
B.1.432270.00086713556219289
B.1.609260.00083501943025982
B.1.1.371250.00080290329832675
B.1.1.373250.00080290329832675
B.1.596240.00077078716639368
B.1.177230.00073867103446061
C.37210.00067443877059447
B.1.1.432200.0006423226386614
P.1200.0006423226386614
B.1.160190.00061020650672833
Q.8180.00057809037479526
B.1.427160.00051385811092912
B.1.1.284150.00048174197899605
B.1.351150.00048174197899605
P.2150.00048174197899605
A.21140.00044962584706298
B.1.575130.00041750971512991
D.3130.00041750971512991
B.1.621120.00038539358319684
B.1.1.319120.00038539358319684
AY.35110.00035327745126377
B.1.1.318110.00035327745126377
B.1.1.28100.0003211613193307
Q.3100.0003211613193307
AY.490.00028904518739763
B.1.63690.00028904518739763
B.1.1.30690.00028904518739763
B.1.24390.00028904518739763
B.1.1.35280.00025692905546456
AY.4370.00022481292353149
B.1.41170.00022481292353149
B.1.24070.00022481292353149
B.1.1.2570.00022481292353149
B.1.1.28560.00019269679159842
B.1.40960.00019269679159842
B.1.1.160.00019269679159842
B.1.3650.00016058065966535
B.1.1.3350.00016058065966535
B.1.177.1050.00016058065966535
AY.4450.00016058065966535
B.1.177.3540.00012846452773228
B.1.32440.00012846452773228
B.1.1.4740.00012846452773228
AY.6640.00012846452773228
A.2.440.00012846452773228
B.1.351.240.00012846452773228
Q.140.00012846452773228
B.1.1.29439.634839579921E-5
B.1.31139.634839579921E-5
AY.11839.634839579921E-5
B.1.177.5739.634839579921E-5
B.1.1.16339.634839579921E-5
AY.6139.634839579921E-5
B.1.50939.634839579921E-5
R.139.634839579921E-5
B.1.42939.634839579921E-5
AY.6839.634839579921E-5
B.1.160.2839.634839579921E-5
AY.2326.423226386614E-5
B.626.423226386614E-5
B.1.58926.423226386614E-5
B26.423226386614E-5
B.1.45926.423226386614E-5
B.1.57726.423226386614E-5
AY.1326.423226386614E-5
B.1.52426.423226386614E-5
B.1.1.31126.423226386614E-5
Q.426.423226386614E-5
B.1.56526.423226386614E-5
B.1.34026.423226386614E-5
B.1.177.7326.423226386614E-5
B.1.57626.423226386614E-5
B.1.1.22226.423226386614E-5
A.2.5.326.423226386614E-5
B.1.1.40926.423226386614E-5
B.1.621.126.423226386614E-5
A.2926.423226386614E-5
B.1.1.15726.423226386614E-5
AY.10226.423226386614E-5
B.1.36.2126.423226386614E-5
B.1.52526.423226386614E-5
B.1.39626.423226386614E-5
B.1.56813.211613193307E-5
B.1.177.713.211613193307E-5
P.613.211613193307E-5
B.1.36913.211613193307E-5
B.1.62813.211613193307E-5
AY.12013.211613193307E-5
B.1.1.35613.211613193307E-5
B.1.1.39713.211613193307E-5
B.3713.211613193307E-5
B.1.1.37413.211613193307E-5
C.2313.211613193307E-5
B.1.62913.211613193307E-5
B.1.1.23213.211613193307E-5
B.1.177.8113.211613193307E-5
B.1.177.413.211613193307E-5
C.2613.211613193307E-5
AY.5.313.211613193307E-5
B.1.47113.211613193307E-5
B.1.23413.211613193307E-5
A.2.513.211613193307E-5
AY.2613.211613193307E-5
B.1.1.3713.211613193307E-5
B.1.1.8613.211613193307E-5
B.1.55113.211613193307E-5
B.1.25813.211613193307E-5
AY.4213.211613193307E-5
B.1.177.5513.211613193307E-5
Q.713.211613193307E-5
B.1.11313.211613193307E-5
B.1.177.6013.211613193307E-5
B.1.438.113.211613193307E-5
B.1.177.7513.211613193307E-5
AB.113.211613193307E-5
B.1.177.813.211613193307E-5
C.3613.211613193307E-5
B.1.1.22813.211613193307E-5
AY.16.113.211613193307E-5
B.1.258.1613.211613193307E-5
B.1.1.27413.211613193307E-5
AY.5.413.211613193307E-5
B.1.36.713.211613193307E-5
B.1.36713.211613193307E-5
B.1.32013.211613193307E-5
B.1.36.813.211613193307E-5
B.1.177.4413.211613193307E-5
P.1.1413.211613193307E-5
A.23.113.211613193307E-5
B.1.1.36913.211613193307E-5
B.1.9.513.211613193307E-5
B.1.177.3313.211613193307E-5
P.1.1213.211613193307E-5
B.1.1.21613.211613193307E-5
B.1.1.48513.211613193307E-5
B.1.37513.211613193307E-5
AY.5513.211613193307E-5
AY.1213.211613193307E-5
B.1.428.313.211613193307E-5
B.1.1.16113.211613193307E-5
B.1.36.2913.211613193307E-5
B.1.42013.211613193307E-5
B.1.1.22013.211613193307E-5
B.1.1.4513.211613193307E-5
AZ.213.211613193307E-5
AH.213.211613193307E-5
B.1.56213.211613193307E-5
AY.4813.211613193307E-5
B.1.258.2113.211613193307E-5

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.