CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Insertions | Insertion

CoV-GLUE Insertion

Details of the insertion across all lineages:

CountORFPositionCodonNumLengthInsertion Sequence
82ORF1ab/nsp16211011481T

Details of the insertion within lineages (Proportion represents the prop of sequences with the deletion that are assigned to that lineage):

LineageCountProportion
B.190.10975609756098
B.1.280.097560975609756
B.1.617.260.073170731707317
B.1.1.740.048780487804878
B.1.130.036585365853659
AY.4430.036585365853659
AY.10330.036585365853659
B.1.17730.036585365853659
B.1.59620.024390243902439
AY.2520.024390243902439
B.1.23420.024390243902439
AY.11720.024390243902439
B.1.466.210.01219512195122
AY.4310.01219512195122
AY.11910.01219512195122
D.210.01219512195122
AY.310.01219512195122
R.110.01219512195122
B.1.16010.01219512195122
AY.4610.01219512195122
AY.5810.01219512195122
P.1.1410.01219512195122
P.110.01219512195122
AY.7010.01219512195122
B.1.36910.01219512195122
AY.3610.01219512195122
AY.3910.01219512195122
AY.4510.01219512195122
AY.46.610.01219512195122
B.1.57710.01219512195122
B.1.57610.01219512195122
AY.2610.01219512195122
B.1.1.28810.01219512195122
B.1.59510.01219512195122
AU.110.01219512195122
B.1.52610.01219512195122

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.